RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 C16orf47Q6ZP98 133 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 Q6ZPB1 254 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 AHSA2Q719I0 299 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 POMGNT2Q8NAT1 580 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PSD4Q8NDX1 1056 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PROKR2Q8NFJ6 384 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 OR4Q3Q8NH05 313 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 OR5J2Q8NH18 312 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 HAVCR2Q8TDQ0 301 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 RAB2BQ8WUD1 216 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 FAR1Q8WVX9 515 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 GGHQ92820 318 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 MARVELD3Q96A59 401 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 RNF31Q96EP0 1072 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 MRPL48Q96GC5 212 aaKnown RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 TMEM80Q96HE8 168 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 DOK1Q99704 481 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 UTP23Q9BRU9 249 aaKnown RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PTDSS2Q9BVG9 487 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 DSN1Q9H410 356 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 LIN28AQ9H9Z2 209 aaKnown RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 GALNT9Q9HCQ5 603 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ISYNA1Q9NPH2 558 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ACOT13Q9NPJ3 140 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 PAK1IP1Q9NWT1 392 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 QPCTLQ9NXS2 382 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 ALKBH4Q9NXW9 302 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 H2AFY2Q9P0M6 372 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 LUZP4Q9P127 313 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 BOKQ9UMX3 212 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 MOKQ9UQ07 419 aa8.25□□□□□ -1.09
PTPRE-207ENST00000471218 KLF2Q9Y5W3 355 aaPredicted RBP8.25□□□□□ -1.09
PTPRE-207ENST00000471218 POLQO75417 2590 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TRAV27A0A087WT01 109 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 A0A1W2PNV4 684 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TMEM129A0AVI4 362 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 A6NIZ1 184 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF99A8MXY4 864 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CENPBD1B2RD01 187 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 PTGES3LE9PB15 166 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 PRR23D1E9PI22 279 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 LRRTM2O43300 516 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 EIF1BO60739 113 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 NOL3O60936 208 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 RAB36O95755 333 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 PRR23D2P0DMB1 279 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 MYL12AP19105 171 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CNR1P21554 472 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 COL8A1P27658 744 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 NOS3P29474 1203 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 IDUAP35475 653 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CDH11P55287 796 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CDH15P55291 814 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 RAP1BP61224 184 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 RAP1AP62834 184 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ACTC1P68032 377 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ACTA1P68133 377 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 BDH1Q02338 343 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 EMX1Q04741 257 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 C1DQ13901 141 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 INAQ16352 499 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 SMN1Q16637 294 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ALG10Q5BKT4 473 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CLEC12AQ5QGZ9 265 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 NIPAL3Q6P499 406 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 FAM180AQ6UWF9 173 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 IGFL2Q6UWQ7 119 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 IL20RBQ6UXL0 311 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CXXC5Q7LFL8 322 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 FAM122BQ7Z309 247 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 IQCF1Q8N6M8 205 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 WDSUB1Q8N9V3 476 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 LRRC75AQ8NAA5 344 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 OR5M3Q8NGP4 307 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 OR1J4Q8NGS1 313 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 FNDC8Q8TC99 324 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TAAR8Q969N4 342 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 KTI12Q96EK9 354 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 THOC3Q96J01 351 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TNFRSF13CQ96RJ3 184 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 MNTQ99583 582 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 FAM173AQ9BQD7 235 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 PIGQQ9BRB3 760 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 MND1Q9BWT6 205 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 TAPBPLQ9BX59 468 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 CHCHD3Q9NX63 227 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 B4GALT7Q9UBV7 327 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ERGIC3Q9Y282 383 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 EXOGQ9Y2C4 368 aaKnown RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 KLF13Q9Y2Y9 288 aaPredicted RBP8.24□□□□□ -1.09
PTPRE-207ENST00000471218 EXPH5Q8NEV8 1989 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 C2CD3Q4AC94 2353 aa8.24□□□□□ -1.09
PTPRE-207ENST00000471218 ARPC4-TTLL3A0A0A6YYG9 625 aa8.23□□□□□ -1.09
PTPRE-207ENST00000471218 TMEM72A0PK05 275 aa8.23□□□□□ -1.09
PTPRE-207ENST00000471218 TRIM64BA6NI03 449 aa8.23□□□□□ -1.09
PTPRE-207ENST00000471218 TRMUO75648 421 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms