RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 LIMS3P0CW19 117 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 LIMS4P0CW20 117 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 HTR1FP30939 366 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 SDHAP31040 664 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 SRD5A2P31213 254 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 IDUAP35475 653 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 LIPAP38571 399 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 EIF1P41567 113 aaKnown RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 STARP49675 285 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 GTF2A1P52655 376 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 CLDN20P56880 219 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 TBCEQ15813 527 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ACKR1Q16570 336 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 DEFB109BQ30KR1 87 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 CRTC2Q53ET0 693 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 WIPI1Q5MNZ9 446 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 SYT6Q5T7P8 510 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 LINC01590Q5TEZ4 76 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 UBE2UQ5VVX9 321 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 RAET1LQ5VY80 246 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ARHGAP11AQ6P4F7 1023 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 GALNTL5Q7Z4T8 443 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 SLC43A2Q8N370 569 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 RFLNBQ8N5W9 214 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF485Q8NCK3 441 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 OR6S1Q8NH40 331 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF519Q8TB69 540 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 MYDGFQ969H8 173 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 DDIT4LQ96D03 193 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 OR5B2Q96R09 309 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 TEAD3Q99594 435 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 OR51V1Q9H2C8 321 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF703Q9H7S9 590 aaPredicted RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 CCNB1IP1Q9NPC3 277 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 BAIAP2Q9UQB8 552 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 ITPR1Q14643 2758 aa7.47□□□□□ -1.21
GTF3A-206ENST00000470606 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
GTF3A-206ENST00000470606 A0A087WZY1 265 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 A0A0J9YW62 118 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 RIIAD1A6NNX1 92 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 FAM171A2A8MVW0 826 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF99A8MXY4 864 aaPredicted RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 PRR23D1E9PI22 279 aaPredicted RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 NME2P1O60361 137 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MRPS14O60783 128 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 HIST1H2ABP04908 130 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 SP1P08047 785 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 PRR23D2P0DMB1 279 aaPredicted RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 APEHP13798 732 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 NME2P22392 152 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 AHCYP23526 432 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 GSTT1P30711 240 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 TGFBR2P37173 567 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 DIO1P49895 249 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MAP2K6P52564 334 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 SUCLG1P53597 346 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 HCCSP53701 268 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 GFRA1P56159 465 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 H3F3AP84243 136 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 SELENBP1Q13228 472 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MFAP5Q13361 173 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MELKQ14680 651 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 ANKDD1AQ495B1 522 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 ARMC4Q5T2S8 1044 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 OR2G6Q5TZ20 316 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 BORAQ6PGQ7 559 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 C5orf46Q6UWT4 87 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 HIST3H2AQ7L7L0 130 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 GGNQ86UU5 652 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 OR6V1Q8N148 313 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 STX19Q8N4C7 294 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 HAS2Q92819 552 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 HIST1H2ACQ93077 130 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MIB2Q96AX9 1013 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 TXNDC15Q96J42 360 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 FAM173AQ9BQD7 235 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 MFRPQ9BY79 579 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 PRRG3Q9BZD7 231 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 CCDC86Q9H6F5 360 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 ADGRL4Q9HBW9 690 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 FGF20Q9NP95 211 aaPredicted RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 TIMMDC1Q9NPL8 285 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 RYDENQ9NUL5 291 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 DKKL1Q9UK85 242 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 DIMT1Q9UNQ2 313 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 POLHQ9Y253 713 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 EXOGQ9Y2C4 368 aaKnown RBP7.46□□□□□ -1.21
GTF3A-206ENST00000470606 SNX5Q9Y5X3 404 aa7.46□□□□□ -1.21
GTF3A-206ENST00000470606 GTF3C1Q12789 2109 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 SMIM31A0A1B0GVY4 71 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 ZNF891A8MT65 544 aaPredicted RBP7.46□□□□□ -1.22
GTF3A-206ENST00000470606 FAM166BA8MTA8 275 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 LRRTM2O43300 516 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 RNF13O43567 381 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 IDH3BO43837 385 aa7.46□□□□□ -1.22
GTF3A-206ENST00000470606 CEACAM4O75871 244 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms