RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 NPAP1Q9NZP6 1156 aa12.42□□□□□ -0.42
TOP3B-215ENST00000470338 RIMS3Q9UJD0 308 aa12.42□□□□□ -0.42
TOP3B-215ENST00000470338 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
TOP3B-215ENST00000470338 PLCE1Q9P212 2302 aa12.42□□□□□ -0.42
TOP3B-215ENST00000470338 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 HS3ST1O14792 307 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 GSTA4O15217 222 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 SHOX2O60902 331 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 UPK3AO75631 287 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 KRT33AO76009 404 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 CH25HO95992 272 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 CD3EP07766 207 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 THRBP10828 461 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 HLA-DOBP13765 273 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 RBM34P42696 430 aaKnown RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 TAS2R41P59536 307 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 PUDPQ08623 228 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ZP4Q12836 540 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 PIN1Q13526 163 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ZNF74Q16587 644 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 DEF8Q6ZN54 512 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 CBLL1Q75N03 491 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 PXKQ7Z7A4 578 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 NKAIN4Q8IVV8 208 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 UEVLDQ8IX04 471 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 C10orf53Q8N6V4 93 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ZNF611Q8N823 705 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 PIGTQ969N2 578 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 LRRC37BQ96QE4 947 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 OR2M2Q96R28 347 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 FKRPQ9H9S5 495 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 MEPEQ9NQ76 525 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 NOX1Q9Y5S8 564 aa12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ZNF469Q96JG9 3925 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-215ENST00000470338 ZNF587BE7ETH6 402 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 AKAP8O43823 692 aaKnown RBP12.4□□□□□ -0.42
TOP3B-215ENST00000470338 SLC43A1O75387 559 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 DCTN3O75935 186 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 IGF2P01344 180 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 MT-ND1P03886 318 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 ASAH2BP0C7U1 165 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 VTCN1Q7Z7D3 282 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 TMEM123Q8N131 208 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
TOP3B-215ENST00000470338 HS6ST2Q96MM7 605 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 CCT8L2Q96SF2 557 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 KCTD14Q9BQ13 255 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-215ENST00000470338 SPAG4Q9NPE6 437 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 NANSQ9NR45 359 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 FAM53CQ9NYF3 392 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 TAS2R5Q9NYW4 299 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 ZNF229Q9UJW7 825 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 A4GNTQ9UNA3 340 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 AMDHD2Q9Y303 409 aa12.4□□□□□ -0.42
TOP3B-215ENST00000470338 A0A1W2PR80 420 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 KPNA4O00629 521 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 PTAFRP25105 342 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 UGT2B15P54855 530 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 PRPS1P60891 318 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 IL1RL1Q01638 556 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 KLHL17Q6TDP4 642 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 LRRC17Q8N6Y2 441 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 PIK3C3Q8NEB9 887 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 OR1K1Q8NGR3 316 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 MAGEE2Q8TD90 523 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 TMEM239Q8WW34 195 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 LIPHQ8WWY8 451 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 BCL2L2Q92843 193 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 TXNDC15Q96J42 360 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 LRR1Q96L50 414 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 ALKBH3Q96Q83 286 aaPredicted RBP12.39□□□□□ -0.43
TOP3B-215ENST00000470338 CCL19Q99731 98 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 GPR35Q9HC97 309 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 TAGLN3Q9UI15 199 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 SNX13Q9Y5W8 968 aa12.39□□□□□ -0.43
TOP3B-215ENST00000470338 SLC35F4A4IF30 521 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 CLOCKO15516 846 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 TMCC2O75069 709 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF682O95780 498 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 SERPINA1P01009 418 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 IFNW1P05000 195 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 HOXB1P14653 301 aaPredicted RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 NCK1P16333 377 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
TOP3B-215ENST00000470338 AHCYP23526 432 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 HOXC12P31275 282 aa12.38□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF83P51522 516 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms