RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 C1orf140Q5VVS0 124 aa16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 ANKK1Q8NFD2 765 aa16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 TUBGCP3Q96CW5 907 aa16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF837Q96EG3 531 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 C3orf30Q96M34 536 aa16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 MYEF2Q9P2K5 600 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 MARCOQ9UEW3 520 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF346Q9UL40 294 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 NOTCH1P46531 2555 aa16.24■□□□□ 0.19
NCKIPSD-209ENST00000470006 AGAP5A6NIR3 686 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 RNASET2O00584 256 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 FRS3O43559 492 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 NUDT17P0C025 328 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 GKN3PP0CG01 181 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 MAGEB1P43366 347 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 SYPL1Q16563 259 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 XKR7Q5GH72 579 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF771Q7L3S4 317 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 CNPY4Q8N129 248 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 ANKFN1Q8N957 763 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF385DQ9H6B1 395 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 MED29Q9NX70 200 aa16.23■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF99A8MXY4 864 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 M0R3G1 203 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 TPD52L2O43399 206 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 RP2O75695 350 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 AHSA1O95433 338 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 TFPTP0C1Z6 253 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 NCF2P19878 526 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 PRTN3P24158 256 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 LSP1P33241 339 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 PTDSS1P48651 473 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 CLDN8P56748 225 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 PCLAFQ15004 111 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 ATG16L1Q676U5 607 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 WBP2NLQ6ICG8 309 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 TMEM154Q6P9G4 183 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF440Q8IYI8 595 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 PIK3C3Q8NEB9 887 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 VPS37AQ8NEZ2 397 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZDHHC2Q9UIJ5 367 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 RCE1Q9Y256 329 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 ARHGAP32A7KAX9 2087 aa16.22■□□□□ 0.19
NCKIPSD-209ENST00000470006 PRAMEF27A3QJZ7 478 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 POM121CA8CG34 1229 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 ZNF35P13682 527 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 SELENOVP59797 346 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 IL13RA1P78552 427 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 CCL8P80075 99 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 BAMBIQ13145 260 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 MAD2L1Q13257 205 aaPredicted RBP16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 CARD17Q5XLA6 110 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 SAXO2Q658L1 398 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 NOA1Q8NC60 698 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 NEURL3Q96EH8 262 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 TRNT1Q96Q11 434 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 SLC35A5Q9BS91 424 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 MTHFD2LQ9H903 347 aaPredicted RBP16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 RLIMQ9NVW2 624 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 TAAR3PQ9P1P4 343 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 GPR160Q9UJ42 338 aa16.21■□□□□ 0.19
NCKIPSD-209ENST00000470006 PRSS51A0A1B0GVH4 220 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 DNAJC9-AS1A6NH13 148 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 SMIM23A6NLE4 172 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 HMGN4O00479 90 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 NPHS1O60500 1241 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 RAB36O95755 333 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 DBIP07108 87 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 NR2F1P10589 423 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 PNMTP11086 282 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 GATA3P23771 443 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 RPS5P46782 204 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 TEKQ02763 1124 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 ANXA8L1Q5VT79 327 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 ZNF813Q6ZN06 617 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 RETREG3Q86VR2 466 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 PEX5LQ8IYB4 626 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 C4orf33Q8N1A6 199 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 C17orf53Q8N3J3 647 aaPredicted RBP16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 SNX33Q8WV41 574 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 OXGR1Q96P68 337 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 SLC38A1Q9H2H9 487 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 B3GNT2Q9NY97 397 aa16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 NOP53Q9NZM5 478 aaKnown RBP16.2■□□□□ 0.18
NCKIPSD-209ENST00000470006 PRKDCP78527 4128 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 AKAP8O43823 692 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 DEAF1O75398 565 aaPredicted RBP16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 IGHV2-5P01817 119 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 ZNF14P17017 642 aaPredicted RBP16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 KRT4P19013 534 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 LCN2P80188 198 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 LRRC74BQ6ZQY2 392 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 RNF130Q86XS8 419 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 OR8J2Q8NGG1 315 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 MFSD8Q8NHS3 518 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 TIMD4Q96H15 378 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 GPA33Q99795 319 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 ZMAT3Q9HA38 289 aaKnown RBP16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
NCKIPSD-209ENST00000470006 HINT3Q9NQE9 182 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms