RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FPR3P25089 353 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 DPP4P27487 766 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 CEACAM8P31997 349 aaPredicted RBP15.83■□□□□ 0.12
MRPL28-208ENST00000469744 OMPP47874 163 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 AGFG1P52594 562 aaKnown RBP15.83■□□□□ 0.12
MRPL28-208ENST00000469744 ZNF136P52737 540 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 GFRA1P56159 465 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 EFNB1P98172 346 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 AQP6Q13520 282 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 HSPB2Q16082 182 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 SLC25A35Q3KQZ1 300 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 MBOAT2Q6ZWT7 520 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 RRM2BQ7LG56 351 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 HMGN2P46Q86SG4 172 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 MARCH3Q86UD3 253 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 DMRTC2Q8IXT2 367 aaPredicted RBP15.83■□□□□ 0.12
MRPL28-208ENST00000469744 CLDN22Q8N7P3 220 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 C14orf79Q96F83 325 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 SLC41A3Q96GZ6 507 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 SFXN2Q96NB2 322 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 PRRG3Q9BZD7 231 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 MED11Q9P086 117 aa15.83■□□□□ 0.12
MRPL28-208ENST00000469744 SPG11Q96JI7 2443 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 CPSF4LA6NMK7 179 aaKnown RBP15.82■□□□□ 0.12
MRPL28-208ENST00000469744 ZIC3O60481 467 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 CLPXO76031 633 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 UTS2O95399 124 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 IL2RAP01589 272 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 C21orf33P30042 268 aaPredicted RBP15.82■□□□□ 0.12
MRPL28-208ENST00000469744 TGFBR2P37173 567 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 PCYT1AP49585 367 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 NUDT6P53370 316 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 GINS1Q14691 196 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 GPR68Q15743 365 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 MED12LQ86YW9 2145 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 RNF113BQ8IZP6 322 aaKnown RBP15.82■□□□□ 0.12
MRPL28-208ENST00000469744 C9orf106Q8NAJ2 232 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 OR2M3Q8NG83 312 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 TEX47Q8TBZ9 253 aa15.82■□□□□ 0.12
MRPL28-208ENST00000469744 IRGMA1A4Y4 181 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 TRAPPC13A5PLN9 417 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 CDHR4A6H8M9 788 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 CD8B2A6NJW9 211 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 M0R082 166 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 KLF4O43474 513 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 ENTPD6O75354 484 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 SOX14O95416 240 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 INHBBP09529 407 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 CPN1P15169 458 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 CD36P16671 472 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 TIMP3P35625 211 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 UGT2B10P36537 528 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 LHX2P50458 406 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 MYBPHQ13203 477 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 SPCS2Q15005 226 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 TIGD6Q17RP2 521 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 FIGNL1Q6PIW4 674 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 POMZP3Q6PJE2 187 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 APOOLQ6UXV4 268 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 SLC46A3Q7Z3Q1 461 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 GRAMD2AQ8IUY3 354 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 FADS6Q8N9I5 356 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 OSTF1Q92882 214 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 GPA33Q99795 319 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 G6PC3Q9BUM1 346 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 MCCC2Q9HCC0 563 aa15.81■□□□□ 0.12
MRPL28-208ENST00000469744 MRPS18AQ9NVS2 196 aaKnown RBP15.81■□□□□ 0.12
MRPL28-208ENST00000469744 TESQ9UGI8 421 aaKnown RBP15.81■□□□□ 0.12
MRPL28-208ENST00000469744 MRTO4Q9UKD2 239 aaKnown RBP15.81■□□□□ 0.12
MRPL28-208ENST00000469744 MBD3L4A6NDZ8 208 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 MBD3L3A6NE82 208 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 MBD3L5A6NJ08 208 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 DVL2O14641 736 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 FRS3O43559 492 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 IGFBP1P08833 259 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 ADORA3P0DMS8 318 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 UQCRC1P31930 480 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 PSMD4P55036 377 aaKnown RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 DSCR4P56555 118 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 B3GALT5-AS1P59052 145 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 FOXD4Q12950 439 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 SF3B4Q15427 424 aaKnown RBP eCLIP15.8■□□□□ 0.129e-6■■■■■ 27.7
MRPL28-208ENST00000469744 MAPK14Q16539 360 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 TMEM44Q2T9K0 475 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 ZNF829Q3KNS6 432 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 CCNJQ5T5M9 372 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 SLC27A4Q6P1M0 643 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 ZAR1Q86SH2 424 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 KIF18BQ86Y91 864 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 OR5M1Q8NGP8 315 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 MBD3L2Q8NHZ7 208 aaPredicted RBP15.8■□□□□ 0.12
MRPL28-208ENST00000469744 ZPLD1Q8TCW7 415 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 DUSP19Q8WTR2 217 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 OIT3Q8WWZ8 545 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 TMEM80Q96HE8 168 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 TEX12Q9BXU0 123 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 TBL1XR1Q9BZK7 514 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 AMBNQ9NP70 447 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 CELSR1Q9NYQ6 3014 aa15.8■□□□□ 0.12
MRPL28-208ENST00000469744 TEP1Q99973 2627 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms