RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 YTHDF1Q9BYJ9 559 aaKnown RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 FN3KQ9H479 309 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RNF122Q9H9V4 155 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 CMC2Q9NRP2 79 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PLCXD1Q9NUJ7 323 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 PAQR5Q9NXK6 330 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-204ENST00000469232 ZMIZ1Q9ULJ6 1067 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 RASD1Q9Y272 281 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 GMPPBQ9Y5P6 360 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 LIPGQ9Y5X9 500 aa7.3□□□□□ -1.24
NPHP3-204ENST00000469232 USP24Q9UPU5 2620 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 BOD1L1Q8NFC6 3051 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 PIEZO2Q9H5I5 2752 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 A0A1W2PNR3 127 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 CENPBD1B2RD01 187 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF814B7Z6K7 855 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 MCIDASD6RGH6 385 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SULT2B1O00204 365 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SMAD9O15198 467 aaKnown RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TRAF3IP2O43734 574 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 AHCYL1O43865 530 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 WBP4O75554 376 aaKnown RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 WISP2O76076 250 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 FAM87AP0C7U9 286 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 POU3F2P20265 443 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SFTPDP35247 375 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 PCYT1AP49585 367 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 PUDPQ08623 228 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 CD47Q08722 323 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 FOXD4Q12950 439 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 MED21Q13503 144 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 OR7A5Q15622 319 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 OCLNQ16625 522 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 KRTCAP3Q53RY4 240 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ALG10Q5BKT4 473 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ARMC4Q5T2S8 1044 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TMEM236Q5W0B7 351 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 FGD2Q7Z6J4 655 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 C8orf59Q8N0T1 100 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TMEM99Q8N816 258 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 OR52L1Q8NGH7 329 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ZPLD1Q8TCW7 415 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 APH1BQ8WW43 257 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 CYGBQ8WWM9 190 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 NMD3Q96D46 503 aaKnown RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 GPR137Q96N19 417 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF570Q96NI8 536 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 OXGR1Q96P68 337 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 NR1H4Q96RI1 486 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 APOL4Q9BPW4 351 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TAPBPLQ9BX59 468 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ASPNQ9BXN1 380 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SRXN1Q9BYN0 137 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 NMNAT2Q9BZQ4 307 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TSPAN10Q9H1Z9 355 aaPredicted RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TXNIPQ9H3M7 391 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 GP6Q9HCN6 339 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TBC1D23Q9NUY8 699 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 MRPS18AQ9NVS2 196 aaKnown RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SEC14L4Q9UDX3 406 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 RNF6Q9Y252 685 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF175Q9Y473 711 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF407Q9C0G0 2248 aa7.29□□□□□ -1.24
NPHP3-204ENST00000469232 TPRP12270 2363 aaKnown RBP7.29□□□□□ -1.24
NPHP3-204ENST00000469232 SH3D21A4FU49 640 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF716A6NP11 495 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 KDM4EB2RXH2 506 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 H0YC42 278 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 H3BN98 237 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TFECO14948 347 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CYTIPO60759 359 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CLIC3O95833 236 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 HIST1H2ABP04908 130 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CCDC159P0C7I6 412 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TFPIP10646 304 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 SDHAP31040 664 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 SLC15A1P46059 708 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 STARP49675 285 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ZNF133P52736 654 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TPD52P55327 224 aaPredicted RBP7.28□□□□□ -1.24
NPHP3-204ENST00000469232 OR2B6P58173 313 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CDC42P60953 191 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CDK5R2Q13319 367 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 PMS2P3Q13401 168 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 SLC17A1Q14916 467 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 NADK2Q4G0N4 442 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 PDSS1Q5T2R2 415 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 AADACL4Q5VUY2 407 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 FAM205BPQ63HN1 556 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ARHGAP11AQ6P4F7 1023 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 HIST3H2AQ7L7L0 130 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 CCDC103Q8IW40 242 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 IQCF1Q8N6M8 205 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ARIH2OSQ8N7S6 290 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 ZIC4Q8N9L1 334 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 NPEPL1Q8NDH3 523 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 OR10D3Q8NH80 312 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 TMEM163Q8TC26 289 aa7.28□□□□□ -1.24
NPHP3-204ENST00000469232 HIST1H2ACQ93077 130 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms