RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PLPP3O14495 311 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 XKRYO14609 159 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 GPR171O14626 319 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 IFNGP01579 166 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 IL2RAP01589 272 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ALPLP05186 524 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ASAH2BP0C7U1 165 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 NR2C1P13056 603 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 OSMP13725 252 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ACVR2AP27037 513 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 AQP2P41181 271 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 UQCRFS1P47985 274 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 PTDSS1P48651 473 aaKnown RBP7.26□□□□□ -1.25
HDAC6-216ENST00000468949 DAPP51397 102 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SMSP52788 366 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 CTXN1P60606 82 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ESRRGP62508 458 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 PPP2R2BQ00005 443 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 RPL18Q07020 188 aaKnown RBP7.26□□□□□ -1.25
HDAC6-216ENST00000468949 EIF2S3LQ2VIR3 472 aaKnown RBP7.26□□□□□ -1.25
HDAC6-216ENST00000468949 KDM4DQ6B0I6 523 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ABLIM2Q6H8Q1 611 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF770Q6IQ21 691 aaPredicted RBP7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SLC27A4Q6P1M0 643 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 KLHL17Q6TDP4 642 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 IZUMO2Q6UXV1 221 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 CD300LDQ6UXZ3 194 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 RPTNQ6XPR3 784 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 IGFN1Q86VF2 1251 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 PARP8Q8N3A8 854 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 LRRC17Q8N6Y2 441 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 CLDN22Q8N7P3 220 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 TMEM99Q8N816 258 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 OR2T33Q8NG76 320 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 CYGBQ8WWM9 190 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 LIPHQ8WWY8 451 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ROBO4Q8WZ75 1007 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SAMD8Q96LT4 415 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF570Q96NI8 536 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 OXGR1Q96P68 337 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SLC38A2Q96QD8 506 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SF3B5Q9BWJ5 86 aaKnown RBP7.26□□□□□ -1.25
HDAC6-216ENST00000468949 TSSK6Q9BXA6 273 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 Q9H521 79 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 EGLN3Q9H6Z9 239 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 CALHM2Q9HA72 323 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 GLRX2Q9NS18 164 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 IMPAD1Q9NX62 359 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 GRHPRQ9UBQ7 328 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 BAIAP2Q9UQB8 552 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 SIGLEC7Q9Y286 467 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 HIF3AQ9Y2N7 669 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 EMC9Q9Y3B6 208 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 HEATR5AQ86XA9 2040 aa7.26□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF726A6NNF4 738 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 RIIAD1A6NNX1 92 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 SMAD9O15198 467 aaKnown RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ZNHIT1O43257 154 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 KLF4O43474 513 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CYTIPO60759 359 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 MITFO75030 526 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 KRT33AO76009 404 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 PPP1R3DO95685 299 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 BCL10O95999 233 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 F13BP05160 661 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CD14P08571 375 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF3P17036 446 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 PAICSP22234 425 aaKnown RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 GNLYP22749 145 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 AGFG1P52594 562 aaKnown RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CRISP1P54107 249 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CDC42P60953 191 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 RPS4XP62701 263 aaKnown RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ZIK1Q3SY52 487 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 FAM205BPQ63HN1 556 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 NSUN5P2Q63ZY6 315 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 GPR139Q6DWJ6 353 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 TMEM211Q6ICI0 200 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CASP12Q6UXS9 341 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 C3P1Q6ZMU1 363 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 DPY19L2P2Q6ZN68 376 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 PXKQ7Z7A4 578 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 LSRQ86X29 649 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CCDC103Q8IW40 242 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 DEPDC4Q8N2C3 294 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 FAM26EQ8N5C1 309 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 CNEP1R1Q8N9A8 125 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 OR9K2Q8NGE7 335 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 MOSPD2Q8NHP6 518 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 RNF128Q8TEB7 428 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ABHD3Q8WU67 409 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 GMPPAQ96IJ6 420 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ZFP3Q96NJ6 502 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 ERMAPQ96PL5 475 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-216ENST00000468949 TNFRSF13CQ96RJ3 184 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 GPA33Q99795 319 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 KATNB1Q9BVA0 655 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 TOR3AQ9H497 397 aa7.25□□□□□ -1.25
HDAC6-216ENST00000468949 MCCC2Q9HCC0 563 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms