RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CD5P06127 495 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 EIF4EP06730 217 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ANXA2P07355 339 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MMP10P09238 476 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PET100P0DJ07 73 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CALCBP10092 127 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF35P13682 527 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PKMP14618 531 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ARSAP15289 507 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NQO2P16083 231 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 BCKDHBP21953 392 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CPT2P23786 658 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 GABRR2P28476 465 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 HOXC12P31275 282 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 BMI1P35226 326 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ECI1P42126 302 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PTGER3P43115 390 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CDKN1BP46527 198 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NPBWR1P48145 328 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TNFSF10P50591 281 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CCR8P51685 355 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF140P52738 457 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PNLIPRP1P54315 467 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CASP6P55212 293 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 WNT3AP56704 352 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR2B8PP59922 312 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RPS20P60866 119 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RANP62826 216 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NKX6-1P78426 367 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PRR5P85299 388 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CDK5Q00535 292 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 REEP5Q00765 189 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SRSF2Q01130 221 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 KIAA0141Q14154 515 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF234Q14588 700 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM132DQ14C87 1099 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PDCD1Q15116 288 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RGNQ15493 299 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR8G1Q15617 311 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 UGCGQ16739 394 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MOGAT2Q3SYC2 334 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM35AQ53FP2 167 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SYT14P1Q58G82 188 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MESTQ5EB52 335 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 XKR4Q5GH76 650 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PYY3Q5JQD4 70 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ENTPD8Q5MY95 495 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 AKR1C8PQ5T2L2 129 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 LYPLAL1Q5VWZ2 237 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SYPL2Q5VXT5 272 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FAHD2BQ6P2I3 314 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RPL22L1Q6P5R6 122 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZCCHC12Q6PEW1 402 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ABHD15Q6UXT9 468 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MBOAT1Q6ZNC8 495 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FAM83HQ6ZRV2 1179 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 DNM1P46Q6ZS02 220 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF621Q6ZSS3 439 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 RPS27LQ71UM5 84 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 GRASPQ7Z6J2 395 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 VTCN1Q7Z7D3 282 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 MON1AQ86VX9 555 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FAM131BQ86XD5 332 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 BAP18Q8IXM2 172 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 DEFB106AQ8N104 65 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ARHGEF39Q8N4T4 335 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 TCEANCQ8N8B7 351 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ARL14EPQ8N8R7 260 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 HJURPQ8NCD3 748 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 KREMEN2Q8NCW0 462 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 LFNGQ8NES3 379 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR10A7Q8NGE5 316 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR1S2Q8NGQ3 325 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 POC1BQ8TC44 478 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SLC2A12Q8TD20 617 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CXorf40AQ8TE69 158 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 NUDCD2Q8WVJ2 157 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CLEC4DQ8WXI8 215 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 OR8D1Q8WZ84 308 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SMARCD2Q92925 531 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 EXT2Q93063 718 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 IMP4Q96G21 291 aaKnown RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FAHD2AQ96GK7 314 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PPP1R16AQ96I34 528 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SMIM8Q96KF7 97 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZDHHC15Q96MV8 337 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CASD1Q96PB1 797 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 KLHL5Q96PQ7 755 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 PBDC1Q9BVG4 233 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF471Q9BX82 626 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-207ENST00000468925 HAPLN2Q9GZV7 340 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 COMMD4Q9H0A8 199 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 ATG5Q9H1Y0 275 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 CHST8Q9H2A9 424 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 SLCO5A1Q9H2Y9 848 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 C1orf198Q9H425 327 aa4.46□□□□□ -1.7
SF3B1-207ENST00000468925 FZD8Q9H461 694 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms