RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 GKN3PP0CG01 181 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 RBMY1A1P0DJD3 496 aaKnown RBP1.01□□□□□ -2.25
SSB-208ENST00000468600 TGFBR1P36897 503 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 NAMPTP43490 491 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 PSMD8P48556 350 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 GAMTQ14353 236 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 TRIP10Q15642 601 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 FAM71F2Q6NXP2 309 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 AFTPHQ6ULP2 937 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 SASS6Q6UVJ0 657 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 LGI3Q8N145 548 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 ATP6V0D2Q8N8Y2 350 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 CNNM3Q8NE01 707 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 OR4D9Q8NGE8 314 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 FGF14Q92915 247 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 PELI1Q96FA3 418 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 XPO4Q9C0E2 1151 aaKnown RBP1.01□□□□□ -2.25
SSB-208ENST00000468600 SIGLEC8Q9NYZ4 499 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 SIGLEC9Q9Y336 463 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 RPL36Q9Y3U8 105 aaKnown RBP1.01□□□□□ -2.25
SSB-208ENST00000468600 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
SSB-208ENST00000468600 FANCIQ9NVI1 1328 aa1□□□□□ -2.25
SSB-208ENST00000468600 NPIPA7E9PJI5 369 aa1□□□□□ -2.25
SSB-208ENST00000468600 RAD51BO15315 384 aa1□□□□□ -2.25
SSB-208ENST00000468600 CCNE2O96020 404 aa1□□□□□ -2.25
SSB-208ENST00000468600 ALDOBP05062 364 aa1□□□□□ -2.25
SSB-208ENST00000468600 CSF3P09919 207 aa1□□□□□ -2.25
SSB-208ENST00000468600 NPIPA8P0DM63 369 aa1□□□□□ -2.25
SSB-208ENST00000468600 PRPS2P11908 318 aa1□□□□□ -2.25
SSB-208ENST00000468600 CX3CR1P49238 355 aa1□□□□□ -2.25
SSB-208ENST00000468600 GPM6AP51674 278 aa1□□□□□ -2.25
SSB-208ENST00000468600 ASPHQ12797 758 aa1□□□□□ -2.25
SSB-208ENST00000468600 SPP2Q13103 211 aa1□□□□□ -2.25
SSB-208ENST00000468600 ERCC8Q13216 396 aa1□□□□□ -2.25
SSB-208ENST00000468600 IL15RAQ13261 267 aa1□□□□□ -2.25
SSB-208ENST00000468600 HCP5Q6MZN7 132 aa1□□□□□ -2.25
SSB-208ENST00000468600 LRRC8BQ6P9F7 803 aa1□□□□□ -2.25
SSB-208ENST00000468600 UNQ9165/PRO28630Q6UXU0 137 aa1□□□□□ -2.25
SSB-208ENST00000468600 HSDL2Q6YN16 418 aa1□□□□□ -2.25
SSB-208ENST00000468600 DPY19L4Q7Z388 723 aa1□□□□□ -2.25
SSB-208ENST00000468600 IQCA1Q86XH1 822 aa1□□□□□ -2.25
SSB-208ENST00000468600 LRRC43Q8N309 656 aa1□□□□□ -2.25
SSB-208ENST00000468600 ZNF664Q8N3J9 261 aa1□□□□□ -2.25
SSB-208ENST00000468600 C14orf79Q96F83 325 aa1□□□□□ -2.25
SSB-208ENST00000468600 TSSK3Q96PN8 268 aa1□□□□□ -2.25
SSB-208ENST00000468600 MRPL45Q9BRJ2 306 aaKnown RBP1□□□□□ -2.25
SSB-208ENST00000468600 YY1AP1Q9H869 796 aa1□□□□□ -2.25
SSB-208ENST00000468600 KCNIP1Q9NZI2 227 aa1□□□□□ -2.25
SSB-208ENST00000468600 NPIPA1Q9UND3 350 aa1□□□□□ -2.25
SSB-208ENST00000468600 AK6Q9Y3D8 172 aaKnown RBP1□□□□□ -2.25
SSB-208ENST00000468600 SYCE3A1L190 88 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 DDX39AO00148 427 aaKnown RBP0.99□□□□□ -2.25
SSB-208ENST00000468600 C1GALT1C1LP0DN25 315 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 CRISP1P54107 249 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 SLC7A9P82251 487 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 ZNF546Q86UE3 836 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 THOC6Q86W42 341 aaKnown RBP0.99□□□□□ -2.25
SSB-208ENST00000468600 DENND6BQ8NEG7 585 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 CCDC43Q96MW1 224 aaKnown RBP0.99□□□□□ -2.25
SSB-208ENST00000468600 RUFY1Q96T51 708 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 ATP6V0BQ99437 205 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 TIMM29Q9BSF4 260 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 GSDMCQ9BYG8 508 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 ACTR6Q9GZN1 396 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 NXF5Q9H1B4 397 aaKnown RBP0.99□□□□□ -2.25
SSB-208ENST00000468600 RNF167Q9H6Y7 350 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 ACTR8Q9H981 624 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 GPATCH2LQ9NWQ4 482 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 ATXN10Q9UBB4 475 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 MTRRQ9UBK8 725 aa0.99□□□□□ -2.25
SSB-208ENST00000468600 A0A0U1RQV5 110 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 A0A1W2PNN7 141 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 J3QRE1 110 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 LGALS9O00182 355 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 DDOSTP39656 456 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 OPRK1P41145 380 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 TDO2P48775 406 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 CYB561P49447 251 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 PRRX1P54821 245 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 KRTAP12-1P59990 96 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 MXD4Q14582 209 aaPredicted RBP0.98□□□□□ -2.25
SSB-208ENST00000468600 HES5Q5TA89 166 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 Q6ZS52 159 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 RABEPKQ7Z6M1 372 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 ANKRD23Q86SG2 305 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 SNX32Q86XE0 403 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 OR2L13Q8N349 312 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 STPG2Q8N412 459 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 OR1P1Q8NH06 330 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 SLC13A3Q8WWT9 602 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 NEURL3Q96EH8 262 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 COPS3Q9UNS2 423 aa0.98□□□□□ -2.25
SSB-208ENST00000468600 KDRP35968 1356 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 KERAO60938 352 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 BCAS1O75363 584 aaPredicted RBP0.97□□□□□ -2.25
SSB-208ENST00000468600 SLC25A14O95258 325 aaPredicted RBP0.97□□□□□ -2.25
SSB-208ENST00000468600 CCDC192P0DO97 292 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 FOLR1P15328 257 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 ADRA1AP35348 466 aa0.97□□□□□ -2.25
SSB-208ENST00000468600 PLA2G16P53816 162 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms