RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 HOXB1P14653 301 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-207ENST00000467819 HOXB9P17482 250 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-207ENST00000467819 SRD5A1P18405 259 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 HTR2AP28223 471 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 GRPRP30550 384 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 PPOXP50336 477 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 HGFACQ04756 655 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 NPRL3Q12980 569 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 CEACAM16Q2WEN9 425 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 FAM69AQ5T7M9 428 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 C6orf89Q6UWU4 347 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 GOLGA6L1Q8N7Z2 621 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 SLC38A4Q969I6 547 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 ZNF837Q96EG3 531 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-207ENST00000467819 RSPO3Q9BXY4 272 aaPredicted RBP18.27■□□□□ 0.52
COL9A3-207ENST00000467819 BPESC1Q9GZL8 116 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 CRLF2Q9HC73 371 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 MOV10Q9HCE1 1003 aaKnown RBP18.27■□□□□ 0.52
COL9A3-207ENST00000467819 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.52
COL9A3-207ENST00000467819 IGKV1D-42A0A075B6H8 117 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF503-AS2A6NEH8 195 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 OR2T1O43869 369 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 CBR1P16152 277 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 PRKAR1BP31321 381 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 THBS4P35443 961 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 CAPZA2P47755 286 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 SLC18A1P54219 525 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 STX1BP61266 288 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 KRTAP24-1Q3LI83 254 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 FAM120AOSQ5T036 256 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 COMTD1Q86VU5 262 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 FAM169BQ8N8A8 192 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 NUP37Q8NFH4 326 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 RNF217Q8TC41 542 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 OR2M2Q96R28 347 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 RAB1BQ9H0U4 201 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 C12orf10Q9HB07 376 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 SLC25A37Q9NYZ2 338 aa18.26■□□□□ 0.51
COL9A3-207ENST00000467819 TRAV36DV7A0A075B6V5 113 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 IGHV2OR16-5A0A0B4J2B6 119 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 AKAP8O43823 692 aaKnown RBP18.25■□□□□ 0.51
COL9A3-207ENST00000467819 FZD7O75084 574 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ARAFP10398 606 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ETS2P15036 469 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 NPR2P20594 1047 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 SRSF2Q01130 221 aaKnown RBP18.25■□□□□ 0.51
COL9A3-207ENST00000467819 GLIPR1L2Q4G1C9 344 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ALG10BQ5I7T1 473 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 GCNT6Q5T4J0 391 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 CARD17Q5XLA6 110 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 C5orf46Q6UWT4 87 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 H1FNTQ75WM6 255 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-207ENST00000467819 SPATA21Q7Z572 469 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 MDP1Q86V88 176 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ZCCHC24Q8N2G6 241 aaKnown RBP18.25■□□□□ 0.51
COL9A3-207ENST00000467819 C10orf111Q8N326 155 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 SVOPLQ8N434 492 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 PIK3C3Q8NEB9 887 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ANKK1Q8NFD2 765 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 TLCD1Q96CP7 247 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF442Q9H7R0 627 aa18.25■□□□□ 0.51
COL9A3-207ENST00000467819 SH3PXD2BA1X283 911 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 M0R3G1 203 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 TRAF3IP2O43734 574 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-207ENST00000467819 TPST1O60507 370 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 NQO1P15559 274 aaKnown RBP18.24■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF23P17027 643 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 NCALDP61601 193 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 PHYHD1Q5SRE7 291 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 DHRS4L2Q6PKH6 230 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 EPGNQ6UW88 154 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 MSRB3Q8IXL7 192 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 TMEM123Q8N131 208 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 LSMEM1Q8N8F7 131 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 DNAJA4Q8WW22 397 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-207ENST00000467819 SLAMF8Q9P0V8 285 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 KLHL14Q9P2G3 628 aa18.24■□□□□ 0.51
COL9A3-207ENST00000467819 LRP5LA4QPB2 252 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 VSTM5A8MXK1 200 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF99A8MXY4 864 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-207ENST00000467819 POLR3GO15318 223 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-207ENST00000467819 STAMBPO95630 424 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 HPRP00739 348 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 TGFAP01135 160 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 DAOP14920 347 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 HNF1AP20823 631 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 ARR3P36575 388 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 CDK6Q00534 326 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 SNTB2Q13425 540 aaKnown RBP18.23■□□□□ 0.51
COL9A3-207ENST00000467819 LRIF1Q5T3J3 769 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 KRT80Q6KB66 452 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 REEP3Q6NUK4 255 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 KRT73Q86Y46 540 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 FUNDC1Q8IVP5 155 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 UEVLDQ8IX04 471 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 ZNF540Q8NDQ6 660 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 ANKRD27Q96NW4 1050 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 SOX7Q9BT81 388 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 EMC6Q9BV81 110 aa18.23■□□□□ 0.51
COL9A3-207ENST00000467819 SPATA5L1Q9BVQ7 753 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms