RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 INHBBP09529 407 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 VAMP1P23763 118 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ELK4P28324 431 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SFTPDP35247 375 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 OR3A3P47888 321 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GFRA1P56159 465 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 CRYZQ08257 329 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GLYR1Q49A26 553 aaPredicted RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SYT14P1Q58G82 188 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 C1QL3Q5VWW1 255 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF770Q6IQ21 691 aaPredicted RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZER1Q7Z7L7 766 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 HIPK1Q86Z02 1210 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MARVELD2Q8N4S9 558 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 CBR4Q8N4T8 237 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MARC2Q969Z3 335 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 KTI12Q96EK9 354 aaPredicted RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 FAM46AQ96IP4 442 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 HS6ST2Q96MM7 605 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM43Q9BTV4 400 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 LDAHQ9H6V9 325 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ACKR4Q9NPB9 350 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZC4H2Q9NQZ6 224 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 MED31Q9Y3C7 131 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 CFAP46Q8IYW2 2715 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF98A6NK75 572 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 A8MVM7 634 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 LRRN3E7EW58 273 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 TOR1AO14656 332 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF208O43345 1280 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 NPIPB7O75200 414 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 HSMCR30P0CW71 290 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SHC1P29353 583 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 RPS5P46782 204 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GDI2P50395 445 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GALK2Q01415 458 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ALDH6A1Q02252 535 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 OGFRL1Q5TC84 451 aaPredicted RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 PGBD2Q6P3X8 592 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ZBTB49Q6ZSB9 765 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 RHOUQ7L0Q8 258 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 RNF113BQ8IZP6 322 aaKnown RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 AQP11Q8NBQ7 271 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SMPDL3BQ92485 455 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 DDIT4LQ96D03 193 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 FEVQ99581 238 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 GPA33Q99795 319 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 NIPSNAP1Q9BPW8 284 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 COQ10BQ9H8M1 238 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SERINC1Q9NRX5 453 aa6.18□□□□□ -1.42
SCAF4-204ENST00000467731 SPIN1Q9Y657 262 aaPredicted RBP6.18□□□□□ -1.42
SCAF4-204ENST00000467731 ARRDC5A6NEK1 342 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF701M0R085 212 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CDC42EP2O14613 210 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 IFI30P13284 250 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 GPR4P46093 362 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 OMPP47874 163 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 STARP49675 285 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 DAPP51397 102 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 MAP2K6P52564 334 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 APOFQ13790 326 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 SGCAQ16586 387 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM176BQ3YBM2 270 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 C1orf140Q5VVS0 124 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 C1orf94Q6P1W5 598 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TRILQ7L0X0 811 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 SIAH3Q8IW03 269 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ATG16L2Q8NAA4 619 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF680Q8NEM1 530 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 NEIL3Q8TAT5 605 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 PIGXQ8TBF5 258 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 MAGEE2Q8TD90 523 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 STK35Q8TDR2 534 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TAAR8Q969N4 342 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 GTPBP3Q969Y2 492 aaKnown RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 BPIFA2Q96DR5 249 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 SLC19A3Q9BZV2 496 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 SMURF2Q9HAU4 748 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TRGV5A0A0B4J1U4 118 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 A0A1B0GWJ7 208 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 A0A1W2PNR3 127 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 NPIPA5E9PKD4 350 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 DENRO43583 198 aaKnown RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CLN5O75503 358 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 OR7A10O76100 309 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CH25HO95992 272 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ALPLP05186 524 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TFPIP10646 304 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ATP6V1B1P15313 513 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF26P17031 533 aaPredicted RBP6.17□□□□□ -1.42
SCAF4-204ENST00000467731 FUT1P19526 365 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 MAKP20794 623 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CBLP22681 906 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CHMP24386 653 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 TALDO1P37837 337 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CTBP2P56545 445 aa6.17□□□□□ -1.42
SCAF4-204ENST00000467731 CLDN20P56880 219 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms