RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	FAM69A	Q5T7M9	428 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	SLX4IP	Q5VYV7	408 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC27A4	Q6P1M0	643 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	C3orf33	Q6P1S2	294 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF620	Q6ZNG0	422 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	ADGRE4P	Q86SQ3	457 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	OAF	Q86UD1	273 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	ADGRG3	Q86Y34	549 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	RELL2	Q8NC24	303 aa	Predicted RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	FAM46A	Q96IP4	442 aa	Known RBP	10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	CNBD2	Q96M20	576 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	UCN2	Q96RP3	112 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	TRIB1	Q96RU8	372 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	PIGQ	Q9BRB3	760 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF229	Q9UJW7	825 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	BLOC1S6	Q9UL45	172 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	CORIN	Q9Y5Q5	1042 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	DCHS2	Q6V1P9	2916 aa		10.8	□□□□□ -0.68
CTNS-205	ENST00000467663	CSMD1	Q96PZ7	3565 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	MAGEA13P	A6NCF6	341 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	GJE1	A6NN92	205 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	IDH3B	O43837	385 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	FZD7	O75084	574 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	TNFAIP8	O95379	198 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	HIST1H2AB	P04908	130 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	FUT1	P19526	365 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	BMP5	P22003	454 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	FUT4	P22083	530 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	DPP4	P27487	766 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	PEX19	P40855	299 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	TOMM34	Q15785	309 aa	Predicted RBP	10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF74	Q16587	644 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	TMEM44	Q2T9K0	475 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	ZBED5	Q49AG3	693 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	RBM48	Q5RL73	367 aa	Known RBP	10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	OR5M10	Q6IEU7	315 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	SMARCD3	Q6STE5	483 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	ARSK	Q6UWY0	536 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	CASP12	Q6UXS9	341 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	HIST3H2A	Q7L7L0	130 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	OR8J1	Q8NGP2	316 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	MFSD8	Q8NHS3	518 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	FBLIM1	Q8WUP2	373 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	HIST1H2AC	Q93077	130 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	MUS81	Q96NY9	551 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC38A2	Q96QD8	506 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	TUBA1C	Q9BQE3	449 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	NANS	Q9NR45	359 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	IMPAD1	Q9NX62	359 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	DKKL1	Q9UK85	242 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	SIGLEC7	Q9Y286	467 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	HDGFL3	Q9Y3E1	203 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	FREM3	P0C091	2139 aa		10.79	□□□□□ -0.68
CTNS-205	ENST00000467663	INTS1	Q8N201	2190 aa	Known RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	IGKV1D-42	A0A075B6H8	117 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SH3D21	A4FU49	640 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SNTN	A6NMZ2	147 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	C17orf51	A8MQB3	221 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	PTP4A3	O75365	173 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	NDUFB2	O95178	105 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	IL18BP	O95998	194 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	TP53	P04637	393 aa	Predicted RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	CCDC159	P0C7I6	412 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	APEH	P13798	732 aa	Known RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF708	P17019	499 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	HK1	P19367	917 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	CTSS	P25774	331 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC6A6	P31641	620 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	GPR4	P46093	362 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	STAR	P49675	285 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	LHX2	P50458	406 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	ASCL1	P50553	236 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	CHN2	P52757	468 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	B3GALT5-AS1	P59052	145 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	ISL1	P61371	349 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	EGR4	Q05215	589 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	BCL2A1	Q16548	175 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC25A30	Q5SVS4	291 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	C1orf140	Q5VVS0	124 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	MEDAG	Q5VYS4	303 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	ANKRD34A	Q69YU3	496 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	C12orf73	Q69YU5	71 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SCAI	Q8N9R8	606 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	C9orf106	Q8NAJ2	232 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	OR2T33	Q8NG76	320 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	PFN4	Q8NHR9	129 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	HDAC2	Q92769	488 aa	Known RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	RNASE6	Q93091	150 aa	Known RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663		Q96MT0	163 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	SFXN2	Q96NB2	322 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	GPX7	Q96SL4	187 aa	Predicted RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	POLDIP3	Q9BY77	421 aa	Known RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	OR52D1	Q9H346	318 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	C20orf141	Q9NUB4	165 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	JKAMP	Q9P055	326 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	FOXD3	Q9UJU5	478 aa	Predicted RBP	10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	TRAPPC4	Q9Y296	219 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	HIF3A	Q9Y2N7	669 aa		10.78	□□□□□ -0.68
CTNS-205	ENST00000467663	OTOG	Q6ZRI0	2925 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms