RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TRIM3	O75382	744 aa	Predicted RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	DXO	O77932	396 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	REN	P00797	406 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	SBK2	P0C263	348 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	IMPDH2	P12268	514 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	SPI1	P17947	270 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	PEX19	P40855	299 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	CDKN2A	P42771	156 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	SLC25A1	P53007	311 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	DSCR4	P56555	118 aa	Predicted RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	NCS1	P62166	190 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ACTC1	P68032	377 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ACTA1	P68133	377 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	MYBPH	Q13203	477 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	SSX1	Q16384	188 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ABHD17B	Q5VST6	288 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	TIGD3	Q6B0B8	471 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	LHFPL3	Q86UP9	236 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	VASH2	Q86V25	355 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF227	Q86WZ6	799 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ACBD7	Q8N6N7	88 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	POMGNT2	Q8NAT1	580 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	CLEC1A	Q8NC01	280 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	OR10H4	Q8NGA5	316 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	OR52N1	Q8NH53	320 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	RPL3L	Q92901	407 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZMYND19	Q96E35	227 aa	Predicted RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	GNRHR2	Q96P88	292 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	CNN2	Q99439	309 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	TBX5	Q99593	518 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ALG8	Q9BVK2	526 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	CHST11	Q9NPF2	352 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	RPRD1B	Q9NQG5	326 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	INPP5E	Q9NRR6	644 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ASB6	Q9NWX5	421 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	STMN3	Q9NZ72	180 aa		11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF346	Q9UL40	294 aa	Known RBP	11.08	□□□□□ -0.64
HDLBP-231	ENST00000467435		A0A1W2PRG6	482 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	DAPL1	A0PJW8	107 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435		H7C1C5	153 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	XKRY	O14609	159 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	FZD7	O75084	574 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	BCL10	O95999	233 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	F10	P00742	488 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF17	P17021	662 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF182	P17025	639 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ACVR1B	P36896	505 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	CLK1	P49759	484 aa	Known RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	RPL27	P61353	136 aa	Known RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	VBP1	P61758	197 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	LCN6	P62502	163 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	FOXK1	P85037	733 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	TLE3	Q04726	772 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	PUDP	Q08623	228 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	PON3	Q15166	354 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ACKR1	Q16570	336 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	TIMM50	Q3ZCQ8	353 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	GLYR1	Q49A26	553 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ATP1A1-AS1	Q5TC04	95 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	RAET1L	Q5VY80	246 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	H1FNT	Q75WM6	255 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ADCK1	Q86TW2	530 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	EXD3	Q8N9H8	876 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	OR51L1	Q8NGJ5	315 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	OR6K6	Q8NGW6	343 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF519	Q8TB69	540 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	NDNF	Q8TB73	568 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	GATAD2B	Q8WXI9	593 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	SMPDL3B	Q92485	455 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	C5orf34	Q96MH7	638 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	UBL7	Q96S82	380 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ZNF649	Q9BS31	505 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	OR51E2	Q9H255	320 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	TXNIP	Q9H3M7	391 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	ISYNA1	Q9NPH2	558 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	TIMMDC1	Q9NPL8	285 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	NDUFB11	Q9NX14	153 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	DLL3	Q9NYJ7	618 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	LRFN1	Q9P244	771 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	WDR87	Q6ZQQ6	2873 aa		11.07	□□□□□ -0.64
HDLBP-231	ENST00000467435	LOC100506127	A0A0U1RQW1	187 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435		A0A1W2PNR3	127 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435		A0A1W2PNV4	684 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	ARGFX	A6NJG6	315 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	LRRC3C	A6NJW4	275 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	SLC30A4	O14863	429 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	ARHGEF9	O43307	516 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	AHCYL1	O43865	530 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	CBR3	O75828	277 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	GLCE	O94923	617 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	AKR7A3	O95154	331 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	CPE	P16870	476 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	FKBP2	P26885	142 aa	Known RBP	11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	SHC1	P29353	583 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	SRD5A2	P31213	254 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	PYCR1	P32322	319 aa		11.06	□□□□□ -0.64
HDLBP-231	ENST00000467435	SFTPD	P35247	375 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms