RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 FDFT1P37268 417 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CRYBB2P43320 205 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 GYG1P46976 350 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 DAP3P51398 398 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CRYBB1P53674 252 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PKNOX1P55347 436 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PLP1P60201 277 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 GK3PQ14409 553 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 KCNJ11Q14654 390 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 XKR7Q5GH72 579 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 C1orf220Q5T0J3 134 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RAET1LQ5VY80 246 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 LRRC31Q6UY01 552 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ZFP2Q6ZN57 461 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 C19orf35Q6ZS72 473 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CENPQQ7L2Z9 268 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 BIVMQ86UB2 503 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 TRIM69Q86WT6 500 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 C17orf82Q86X59 251 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 KRTAP13-1Q8IUC0 172 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CCDC65Q8IXS2 484 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 OR2L13Q8N349 312 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SDR9C7Q8NEX9 313 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CCDC148Q8NFR7 591 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 OR6C4Q8NGE1 309 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 OR1L6Q8NGR2 347 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 MAGEE2Q8TD90 523 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 TCTEX1D2Q8WW35 142 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 HTR3CQ8WXA8 447 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 STARD8Q92502 1023 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 DCUN1D4Q92564 292 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 UBE2E3Q969T4 207 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CXorf40BQ96DE9 158 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 MS4A14Q96JA4 679 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PKNOX2Q96KN3 472 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 IFT74Q96LB3 600 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ZNF641Q96N77 438 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PANX2Q96RD6 677 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RNF2Q99496 336 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 FMO2Q99518 471 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ZNF670Q9BS34 389 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SLC17A9Q9BYT1 436 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RAB34Q9BZG1 259 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 VCXQ9H320 206 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RBKSQ9H477 322 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SMYD3Q9H7B4 428 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 CAB39LQ9H9S4 337 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NMRAL1Q9HBL8 299 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NEK6Q9HC98 313 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ZNF160Q9HCG1 818 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NT5MQ9NPB1 228 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SPRR3Q9UBC9 169 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 WARS2Q9UGM6 360 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 SLC7A8Q9UHI5 535 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PHF11Q9UIL8 331 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 RIMS3Q9UJD0 308 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 ZNF223Q9UK11 482 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PSME2Q9UL46 239 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 NAP1L2Q9ULW6 460 aaPredicted RBP1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 TMCO1Q9UM00 188 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PEX16Q9Y5Y5 336 aa1.48□□□□□ -2.17
GTF3C3-209ENST00000466862 PLEKHG1Q9ULL1 1385 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 PHLPP2Q6ZVD8 1323 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 SLIT3O75094 1523 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 A0A1B0GUS0 222 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 GOLGA6L7A0A1B0GV03 622 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 A0A1W2PPV9 198 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 SMCO3A2RU48 225 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 PSMB11A5LHX3 300 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 CCDC182A6NF36 153 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 IDSB3KWA1 339 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 L7N2F9 121 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 SULT2B1O00204 365 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 HIP1O00291 1037 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 LSM1O15116 133 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 CASC3O15234 703 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 HCN1O60741 890 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 CABYRO75952 493 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 OXSR1O95747 527 aaPredicted RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 TMEM50AO95807 157 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 SERPIND1P05546 499 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 GCFC2P16383 781 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 COX5AP20674 150 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 ANXA13P27216 316 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 ADORA2BP29275 332 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 RFC4P35249 363 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 GCKP35557 465 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 RPL29P47914 159 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 STARP49675 285 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 CDH6P55285 790 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 RPS15P62841 145 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 MRPS11P82912 194 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 SLC10A7Q0GE19 358 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 ASPHQ12797 758 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 VGLL4Q14135 290 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 GRB7Q14451 532 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 ARHGAP19Q14CB8 494 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 PTGES3Q15185 160 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 LY6EQ16553 131 aa1.47□□□□□ -2.17
GTF3C3-209ENST00000466862 MICBQ29980 383 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms