RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 TRMT61AQ96FX7 289 aaKnown RBP13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 MOGAT1Q96PD6 335 aa13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 ECSITQ9BQ95 431 aa13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 GRIP2Q9C0E4 1043 aa13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 FAIMQ9NVQ4 179 aa13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 POU2F3Q9UKI9 436 aa13.9□□□□□ -0.18
CRAMP1-204ENST00000466562 USF3Q68DE3 2245 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 LRRN3E7EW58 273 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 RPL36A-HNRNPH2H7BZ11 118 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 TRAF3IP2O43734 574 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 SLC43A1O75387 559 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 LYPD3O95274 346 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 HPRP00739 348 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 THY1P04216 161 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 HLA-DOBP13765 273 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 NQO1P15559 274 aaKnown RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 MDH1P40925 334 aaKnown RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ROR2Q01974 943 aaKnown RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 HMBOX1Q6NT76 420 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 KLHL24Q6TFL4 600 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 B3GLCTQ6Y288 498 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 WDR88Q6ZMY6 472 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 TSPYL5Q86VY4 417 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 DEPDC4Q8N2C3 294 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ADAMTS16Q8TE57 1224 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 C10orf82Q8WW14 230 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 RASSF5Q8WWW0 418 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 BCL2L2Q92843 193 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ZNF583Q96ND8 569 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 DHRS9Q9BPW9 319 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ASPNQ9BXN1 380 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 ALG2Q9H553 416 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 OBP2BQ9NPH6 170 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
CRAMP1-204ENST00000466562 SMAD7O15105 426 aaKnown RBP13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 TTKP33981 857 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 PMS2P3Q13401 168 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 VEZF1Q14119 521 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 AGAP6Q5VW22 663 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 CLEC9AQ6UXN8 241 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 NHLRC1Q6VVB1 395 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 UEVLDQ8IX04 471 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 C10orf53Q8N6V4 93 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 PCYOX1LQ8NBM8 494 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 ANKK1Q8NFD2 765 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 MAGEE2Q8TD90 523 aaPredicted RBP13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 OR2M2Q96R28 347 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 PCDHAC1Q9H158 963 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 GID8Q9NWU2 228 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 ARMCX1Q9P291 453 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 SLC7A7Q9UM01 511 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 CAPN7Q9Y6W3 813 aa13.88□□□□□ -0.19
CRAMP1-204ENST00000466562 A0A096LPE4 126 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 ARPC4-TTLL3A0A0A6YYG9 625 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 A0A1W2PPZ6 126 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 PLPP3O14495 311 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 SLC22A2O15244 555 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 AKAP8O43823 692 aaKnown RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 MT-ATP6P00846 226 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 UBE2NP61088 152 aaKnown RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 POU3F1Q03052 451 aaPredicted RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 PUDPQ08623 228 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 ERICH5Q6P6B1 374 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 ANKRD16Q6P6B7 361 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 TTC33Q6PID6 262 aaPredicted RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 TMEM123Q8N131 208 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 GPR137CQ8N3F9 429 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 PIK3C3Q8NEB9 887 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 TXNDC15Q96J42 360 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 EMC6Q9BV81 110 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 FKRPQ9H9S5 495 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 CRLF2Q9HC73 371 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 GPR35Q9HC97 309 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 SH3GLB1Q9Y371 365 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 ATP23Q9Y6H3 246 aa13.87□□□□□ -0.19
CRAMP1-204ENST00000466562 IGHV1-18A0A0C4DH31 117 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 FAM171A2A8MVW0 826 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 NDUFS7O75251 213 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 LY6G6DO95868 133 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 IGHV4-39P01824 125 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 HOXB1P14653 301 aaPredicted RBP13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 HOXB4P17483 251 aaPredicted RBP13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 AHCYP23526 432 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 PAX7P23759 505 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 FABP6P51161 128 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 TUBA1BP68363 451 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 TUBA4AP68366 448 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 ARF1P84077 181 aaKnown RBP13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 TNK1Q13470 666 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 ETFDHQ16134 617 aa13.86□□□□□ -0.19
CRAMP1-204ENST00000466562 ZNF74Q16587 644 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms