RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 UBTFL1P0CB47 393 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 TROVE2P10155 538 aaKnown RBP eCLIP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 HPGDP15428 266 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 FMO3P31513 532 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 VDAC2P45880 294 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 FBXW4P57775 412 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 PLP1P60201 277 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 PRPS1P60891 318 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 PPIL2Q13356 520 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 GPR157Q5UAW9 335 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 C1orf94Q6P1W5 598 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 IL34Q6ZMJ4 242 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 KDM7AQ6ZMT4 941 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 PSTKQ8IV42 348 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 LINC01555Q8NAE3 123 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 VN1R2Q8NFZ6 395 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 KCNG3Q8TAE7 436 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 DCUN1D4Q92564 292 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 FCRL1Q96LA6 429 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 KCTD14Q9BQ13 255 aaPredicted RBP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 PELOQ9BRX2 385 aaKnown RBP3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 NAT9Q9BTE0 207 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 ASB8Q9H765 288 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 NANOGQ9H9S0 305 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 DCAF16Q9NXF7 216 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 QPCTLQ9NXS2 382 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 SLC7A8Q9UHI5 535 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 CTNNA3Q9UI47 895 aa3.02□□□□□ -1.93
CDC42BPA-211ENST00000466538 DYNC1I1O14576 645 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 SLC31A2O15432 143 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 SOX15O60248 233 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 CST1P01037 141 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 KRT6AP02538 564 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 GAPDHP04406 335 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 UQCRFS1P1P0C7P4 283 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 CHTF8P0CG12 524 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 DNAH10OSP0CZ25 163 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ELK1P19419 428 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 TCN1P20061 433 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 GDI1P31150 447 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 TFPI2P48307 235 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 UGT2B15P54855 530 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 KCNJ2P63252 427 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 METAP1DQ6UB28 335 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 TMEM107Q6UX40 140 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF620Q6ZNG0 422 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 RFLNAQ6ZTI6 216 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 PEX26Q7Z412 305 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 TMEM135Q86UB9 458 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ZNF546Q86UE3 836 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 DCAF4L2Q8NA75 395 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 C20orf203Q8NBC4 194 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 SPATA4Q8NEY3 305 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR10G9Q8NGN4 311 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR9G1Q8NH87 305 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 SMARCD2Q92925 531 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ELSPBP1Q96BH3 223 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 MS4A4EQ96PG1 132 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR8B4Q96RC9 309 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 SORT1Q99523 831 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ILKAPQ9H0C8 392 aaPredicted RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 MMP26Q9NRE1 261 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 CALYQ9NYX4 217 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 MTRF1LQ9UGC7 380 aaKnown RBP3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 ATRXP46100 2492 aa3.01□□□□□ -1.93
CDC42BPA-211ENST00000466538 A0A0G2JN53 185 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 GJE1A6NN92 205 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CCL21O00585 134 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 PSTPIP1O43586 416 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 FAM189A1O60320 539 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 C1orf105O95561 183 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TPM2P07951 284 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TDGF1P13385 188 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TNNI1P19237 187 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 SLC2A5P22732 501 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 RBMXP38159 391 aaKnown RBP3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CAV2P51636 162 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TDGF1P3P51864 188 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 GPNMBQ14956 572 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CYTH1Q15438 398 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 RNASEKQ6P5S7 137 aaKnown RBP3□□□□□ -1.93
CDC42BPA-211ENST00000466538 TRIM40Q6P9F5 258 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 SH2D6Q7Z4S9 175 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 SUMF2Q8NBJ7 301 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 OR1N2Q8NGR9 330 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 GPR151Q8TDV0 419 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 FAM151AQ8WW52 585 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 PIBF1Q8WXW3 757 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 HSFY1Q96LI6 401 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 MBOAT4Q96T53 435 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 NRTNQ99748 197 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 RNF167Q9H6Y7 350 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 SIAEQ9HAT2 523 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CLCF1Q9UBD9 225 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 PISDQ9UG56 409 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 NUP50Q9UKX7 468 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 MMP17Q9ULZ9 603 aa3□□□□□ -1.93
CDC42BPA-211ENST00000466538 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms