RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 BTBD10Q9BSF8 475 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 LRRN3Q9H3W5 708 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 MED20Q9H944 212 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 ZNF71Q9NQZ8 489 aaPredicted RBP3.64□□□□□ -1.83
UBR4-209ENST00000465036 B3GAT1Q9P2W7 334 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 SLC2A6Q9UGQ3 507 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 PSORS1C1Q9UIG5 152 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 CRLS1Q9UJA2 301 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 TP53TG3Q9ULZ0 132 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 PLCL2Q9UPR0 1127 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 SATB2Q9UPW6 733 aa3.64□□□□□ -1.83
UBR4-209ENST00000465036 NOSIPQ9Y314 301 aaKnown RBP3.64□□□□□ -1.83
UBR4-209ENST00000465036 URB1O60287 2271 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 IGHV1OR21-1A0A087WYE8 117 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 A0A1W2PN81 502 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 HYKKA2RU49 373 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CCDC162PA2VCL2 907 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PDZK1P1A8MUH7 402 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 F8VVB4 439 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 F8VWA3 439 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 SCO2O43819 266 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 SNX3O60493 162 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 DNAJB6O75190 326 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 WBP4O75554 376 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 POP7O75817 140 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 SRP72O76094 671 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 SYNGR4O95473 234 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CPNE6O95741 557 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 MT-ND1P03886 318 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CCL4P13236 92 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 IRF2P14316 349 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ZNF7P17097 686 aaPredicted RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 CD1CP29017 333 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 SHC1P29353 583 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 BMI1P35226 326 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CHRNA7P36544 502 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 HSD17B2P37059 387 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CCL11P51671 97 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PPP1CAP62136 330 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 RPL23AP62750 156 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 HERV-K104P63124 156 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 UBE2IP63279 158 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 CRADDP78560 199 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ZFP36L1Q07352 338 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 PNRC1Q12796 327 aaPredicted RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 NFATC2Q13469 925 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 IL18Q14116 193 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PRPSAP1Q14558 356 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 C16orf72Q14CZ0 275 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 TAF1AQ15573 450 aaPredicted RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 TRIP10Q15642 601 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 AGKQ53H12 422 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 TCTEX1D4Q5JR98 221 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 ANKRD22Q5VYY1 191 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PDPK2PQ6A1A2 396 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ASPHD2Q6ICH7 369 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 UGT3A1Q6NUS8 523 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 TMEM220Q6QAJ8 160 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 TRAPPC5Q8IUR0 188 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PIANPQ8IYJ0 282 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CLDN19Q8N6F1 224 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 OR13J1Q8NGT2 312 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PNPT1Q8TCS8 783 aaKnown RBP3.63□□□□□ -1.83
UBR4-209ENST00000465036 GIPC3Q8TF64 312 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PHYHIPQ92561 330 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 OSTF1Q92882 214 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 NAT6Q93015 286 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 NXPE2Q96DL1 559 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ALS2CR12Q96Q35 445 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 VPS35Q96QK1 796 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 RAB40CQ96S21 281 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 TRABDQ9H4I3 376 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ASB8Q9H765 288 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 CALHM2Q9HA72 323 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 APMAPQ9HDC9 416 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ASCL3Q9NQ33 180 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ACOXLQ9NUZ1 547 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 HACD3Q9P035 362 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 KLHL9Q9P2J3 617 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 RNF14Q9UBS8 474 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 PSMD13Q9UNM6 376 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 WDR83OSQ9Y284 106 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 STK38LQ9Y2H1 464 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 ATG4BQ9Y4P1 393 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 COMMD3-BMI1R4GMX3 469 aa3.63□□□□□ -1.83
UBR4-209ENST00000465036 NBEAQ8NFP9 2946 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 ZFC3H1O60293 1989 aaKnown RBP3.62□□□□□ -1.83
UBR4-209ENST00000465036 UNC13CQ8NB66 2214 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 IGLV3-16A0A075B6K0 115 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 TRBV5-4A0A0C4DH59 114 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 IGHV5-10-1A0A0J9YXX1 117 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 IQCF5A8MTL0 148 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 A8MU76 341 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 GOLGA8KD6RF30 607 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 NPIPA3F8WFD2 350 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 GOLGA8TH3BQL2 631 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 NDUFS8O00217 210 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 KMOO15229 486 aa3.62□□□□□ -1.83
UBR4-209ENST00000465036 OR1I1O60431 355 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms