RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 RNF138Q8WVD3 245 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 ACOT11Q8WXI4 607 aaPredicted RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 MYDGFQ969H8 173 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 PLEKHA8Q96JA3 519 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 FCRL1Q96LA6 429 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 PANX2Q96RD6 677 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MBOAT4Q96T53 435 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MYCBPQ99417 103 aaPredicted RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 NRTNQ99748 197 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 TMEM246Q9BRR3 403 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 PELOQ9BRX2 385 aaKnown RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 FAIM2Q9BWQ8 316 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 OR11A1Q9GZK7 315 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MFFQ9GZY8 342 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 SIAEQ9HAT2 523 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 LY9Q9HBG7 655 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 MRPL47Q9HD33 250 aaKnown RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 NT5MQ9NPB1 228 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 DAZ3Q9NR90 486 aaKnown RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 ETNK2Q9NVF9 386 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 QPCTLQ9NXS2 382 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 IKZF2Q9UKS7 526 aa2.78□□□□□ -1.96
CLK1-208ENST00000464454 RRP15Q9Y3B9 282 aaKnown RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 COL16A1Q07092 1604 aaPredicted RBP2.78□□□□□ -1.96
CLK1-208ENST00000464454 A0A1W2PPE3 182 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 WI2-2373I1.2A0A1W2PRP0 233 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 RBMY1BA6NDE4 496 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 RBMY1EA6NEQ0 496 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 KRTAP4-16G5E9R7 235 aaPredicted RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 FAM189A1O60320 539 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 ZNF861PO60384 105 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 ERLIN2O94905 339 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 FGF1P05230 155 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 IGHV4-34P06331 123 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 GIPP09681 153 aaPredicted RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 RBMY1DP0C7P1 496 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 RBMY1A1P0DJD3 496 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 MCF2P10911 925 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 HPGDP15428 266 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 SLC2A5P22732 501 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 CCNE1P24864 410 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 PBLDP30039 288 aaPredicted RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 CASP14P31944 242 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 NUDT1P36639 197 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 CTRLP40313 264 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 VHLP40337 213 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 CRYBB2P43320 205 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 YAP1P46937 504 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 TPMTP51580 245 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 SH3BGRP55822 239 aaPredicted RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 LRRC74AQ0VAA2 488 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 PDIA2Q13087 525 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 GK3PQ14409 553 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 KCTD21Q4G0X4 260 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 KDM7AQ6ZMT4 941 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 PIANPQ8IYJ0 282 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 OR1L6Q8NGR2 347 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 NDRG1Q92597 394 aaKnown RBP2.77□□□□□ -1.97
CLK1-208ENST00000464454 FGF14Q92915 247 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 TUBGCP3Q96CW5 907 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 METTL7AQ9H8H3 244 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 EXD2Q9NVH0 621 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 SLC7A8Q9UHI5 535 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 MMP17Q9ULZ9 603 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 SLC25A15Q9Y619 301 aa2.77□□□□□ -1.97
CLK1-208ENST00000464454 A0A0G2JN53 185 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 A0A1B0GUA9 196 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 XKRY2A2RUG3 117 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 MGRN1O60291 552 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 INSP01308 110 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 KRT6AP02538 564 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 UBTFL1P0CB47 393 aaPredicted RBP2.76□□□□□ -1.97
CLK1-208ENST00000464454 NR2C1P13056 603 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 RPS2P15880 293 aaKnown RBP2.76□□□□□ -1.97
CLK1-208ENST00000464454 BST2Q10589 180 aaKnown RBP2.76□□□□□ -1.97
CLK1-208ENST00000464454 CYTH1Q15438 398 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 CTRB2Q6GPI1 263 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 C6orf89Q6UWU4 347 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 Q6ZVH6 145 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 PSTKQ8IV42 348 aaKnown RBP2.76□□□□□ -1.97
CLK1-208ENST00000464454 SLC22A9Q8IVM8 553 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 CNPY4Q8N129 248 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 FAM71E2Q8N5Q1 922 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 OR2L3Q8NG85 312 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 OR4F6Q8NGB9 312 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 SLC2A14Q8TDB8 520 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 SMARCD2Q92925 531 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 C12orf42Q96LP6 360 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 MS4A4EQ96PG1 132 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 NXF3Q9H4D5 531 aaKnown RBP2.76□□□□□ -1.97
CLK1-208ENST00000464454 KLHL28Q9NXS3 571 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 SLC2A8Q9NY64 477 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 CALYQ9NYX4 217 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 CLCF1Q9UBD9 225 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 NUFIP1Q9UHK0 495 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms