RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 NPRL3Q12980 569 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 LARS2Q15031 903 aaKnown RBP14.89□□□□□ -0.03
HMGN1-210ENST00000464078 SLC9B1Q4ZJI4 515 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 C6orf89Q6UWU4 347 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 CLIP4Q8N3C7 705 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 PIK3C3Q8NEB9 887 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 TMEM186Q96B77 213 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF837Q96EG3 531 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-210ENST00000464078 SPATA9Q9BWV2 254 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 TPK1Q9H3S4 243 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 MS4A5Q9H3V2 200 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 ARMC7Q9H6L4 198 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 METTL17Q9H7H0 456 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-210ENST00000464078 B3GNT2Q9NY97 397 aa14.89□□□□□ -0.03
HMGN1-210ENST00000464078 SH3PXD2BA1X283 911 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 TRAF3IP2O43734 574 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-210ENST00000464078 AKAP8O43823 692 aaKnown RBP14.88□□□□□ -0.03
HMGN1-210ENST00000464078 TFP02787 698 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 MSMBP08118 114 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 ACHEP22303 614 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 MRPS11P82912 194 aaKnown RBP14.88□□□□□ -0.03
HMGN1-210ENST00000464078 MSMPQ1L6U9 139 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 ELFN2Q5R3F8 820 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 REP15Q6BDI9 236 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 KRT80Q6KB66 452 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 C5orf46Q6UWT4 87 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF627Q7L945 461 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 SERPINA11Q86U17 422 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 KDM8Q8N371 416 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-210ENST00000464078 CLDND2Q8NHS1 167 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 SLC38A5Q8WUX1 472 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 OR2M2Q96R28 347 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 MRPL37Q9BZE1 423 aaKnown RBP14.88□□□□□ -0.03
HMGN1-210ENST00000464078 C12orf10Q9HB07 376 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 HIF1ANQ9NWT6 349 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 SEC14L4Q9UDX3 406 aa14.88□□□□□ -0.03
HMGN1-210ENST00000464078 AIM2O14862 343 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 OR2T1O43869 369 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 BCHEP06276 602 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 SAGP10523 405 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-210ENST00000464078 RPS5P46782 204 aaKnown RBP14.87□□□□□ -0.03
HMGN1-210ENST00000464078 SLC1A6P48664 564 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 NME5P56597 212 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 FAM69AQ5T7M9 428 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 USP43Q70EL4 1123 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 ADPRHL1Q8NDY3 354 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 SGMS2Q8NHU3 365 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF418Q8TF45 676 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-210ENST00000464078 SLC25A36Q96CQ1 311 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 KTI12Q96EK9 354 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF75AQ96N20 296 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 SLC6A13Q9NSD5 602 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
HMGN1-210ENST00000464078 REV1Q9UBZ9 1251 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF232Q9UNY5 417 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 GRIP1Q9Y3R0 1128 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 GPR45Q9Y5Y3 372 aa14.87□□□□□ -0.03
HMGN1-210ENST00000464078 A0A0G2JPF8 293 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 WDR91A4D1P6 747 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 HNRNPCL2B2RXH8 293 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 HNRNPCL3B7ZW38 293 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 FAM157AC9JC47 383 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 M0R082 166 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 RFXANKO14593 260 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 HNRNPCL1O60812 293 aaKnown RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZCCHC18P0CG32 403 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 HNRNPCL4P0DMR1 293 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF35P13682 527 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ETFAP13804 333 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF14P17017 642 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 GLRXP35754 106 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 GPR6P46095 362 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 CAPZA2P47755 286 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 HILS1P60008 231 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 DSTNP60981 165 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 RPS23P62266 143 aaKnown RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ACTG1P63261 375 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 C1DQ13901 141 aaKnown RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 GSG1Q2KHT4 349 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ATG16L1Q676U5 607 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 TEX29Q8N6K0 151 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 OR51F2Q8NH61 342 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF417Q8TAU3 575 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 FAM216AQ8WUB2 273 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 RDH5Q92781 318 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 TMEM19Q96HH6 336 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZNF587Q96SQ5 575 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 ZBTB18Q99592 522 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 TMEM109Q9BVC6 243 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 DENND2DQ9H6A0 471 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
HMGN1-210ENST00000464078 IFT52Q9Y366 437 aa14.86□□□□□ -0.03
HMGN1-210ENST00000464078 TMEM89A2RUT3 159 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 SDHDO14521 159 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 SEC14L2O76054 403 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 HLA-HP01893 362 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 HPXP02790 462 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 ARFIP2P53365 341 aa14.85□□□□□ -0.03
HMGN1-210ENST00000464078 TMEM33P57088 247 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms