RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 IL10P22301 178 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GABRA3P34903 492 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PGM1P36871 562 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PTGDSP41222 190 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 RFX3P48380 749 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PRIM2P49643 509 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF84P51523 738 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 FBXW4P57775 412 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DSTNP60981 165 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SKP1P63208 163 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 IRX1P78414 480 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DMTNQ08495 405 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PMPCAQ10713 525 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SERTAD2Q14140 314 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 OR1C1Q15619 314 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CD226Q15762 336 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DCST2Q5T1A1 773 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GCNT6Q5T4J0 391 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TYW3Q6IPR3 259 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ENPP6Q6UWR7 440 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PAMR1Q6UXH9 720 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ZNF771Q7L3S4 317 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GALNTL5Q7Z4T8 443 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 VRK2Q86Y07 508 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 RBM45Q8IUH3 476 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MICU2Q8IYU8 434 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 BEST3Q8N1M1 668 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CIARTQ8N365 385 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GATSQ8NAP1 163 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TMEM178AQ8NBL3 297 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PCYOX1LQ8NBM8 494 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MIPOL1Q8TD10 442 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 FAM222BQ8WU58 562 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TMBIM1Q969X1 311 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 EME1Q96AY2 570 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SLCO4A1Q96BD0 722 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 EFHD2Q96C19 240 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 RBM18Q96H35 190 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 BTBD9Q96Q07 612 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NODALQ96S42 347 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SDF2Q99470 211 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NPAS1Q99742 590 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 UTP23Q9BRU9 249 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ELOVL1Q9BW60 279 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 C1orf21Q9H246 121 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TP63Q9H3D4 680 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DENND2DQ9H6A0 471 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SPAG4Q9NPE6 437 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 KLHL1Q9NR64 748 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GIMAP4Q9NUV9 329 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ANKRD10Q9NXR5 420 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 LRFN1Q9P244 771 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PSME2Q9UL46 239 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MKLN1Q9UL63 735 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 POMPQ9Y244 141 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CLCA3PQ9Y6N3 262 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MXRA5Q9NR99 2828 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DSPPQ9NZW4 1301 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 INTS1Q8N201 2190 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 A0A1B0GTH9 108 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NPIPB9F8W1W9 429 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 G3V3Y1 287 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GTPBP1O00178 669 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 TSPAN2O60636 221 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ICOSLGO75144 302 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ENTPD5O75356 428 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CRLF1O75462 422 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 OR2J2O76002 312 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 OR6B1O95007 311 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CYC1P08574 325 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PEPDP12955 493 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CYP4B1P13584 511 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PRG2P13727 222 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 HSD17B1P14061 328 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DDX5P17844 614 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CD53P19397 219 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 ABCD3P28288 659 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PCGF2P35227 344 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PEX19P40855 299 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SOX3P41225 446 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NUP107P57740 925 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MRPS22P82650 360 aaKnown RBP3.23□□□□□ -1.89
SCFD1-204ENST00000463622 HOXC5Q00444 222 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CDK6Q00534 326 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 SCARB2Q14108 478 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 NPTX1Q15818 432 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MEP1AQ16819 746 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 DUSP7Q16829 419 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CYP51A1Q16850 503 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GRAMD1BQ3KR37 738 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 GXYLT1Q4G148 440 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 IQCCQ4KMZ1 466 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CMPK2Q5EBM0 449 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 CCDC144NLQ6NUI1 221 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 PRSS57Q6UWY2 283 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 C16orf89Q6UX73 402 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 MDGA2Q7Z553 956 aa3.23□□□□□ -1.89
SCFD1-204ENST00000463622 VTCN1Q7Z7D3 282 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms