RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SPATA5L1Q9BVQ7 753 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 GPR35Q9HC97 309 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 A4GALTQ9NPC4 353 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 B3GAT2Q9NPZ5 323 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 SDR39U1Q9NRG7 319 aaPredicted RBP13.36□□□□□ -0.27
SKA3-204ENST00000462482 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 USP22Q9UPT9 525 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
SKA3-204ENST00000462482 CR1P17927 2039 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 TRAV36DV7A0A075B6V5 113 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 SLC35F4A4IF30 521 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 M0R082 166 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 CLIC1O00299 241 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 STAMBPO95630 424 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 NQO1P15559 274 aaKnown RBP13.35□□□□□ -0.27
SKA3-204ENST00000462482 CALCRP30988 508 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 THBS4P35443 961 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 SRP14P37108 136 aaKnown RBP13.35□□□□□ -0.27
SKA3-204ENST00000462482 HOXC5Q00444 222 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 DAG1Q14118 895 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 CEACAM16Q2WEN9 425 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 SLC9B1Q4ZJI4 515 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 TNFAIP8L3Q5GJ75 292 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 UEVLDQ8IX04 471 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 SVOPLQ8N434 492 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 GOLGA6L1Q8N7Z2 621 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 ZNF417Q8TAU3 575 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 VPS33AQ96AX1 596 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 MAELQ96JY0 434 aaKnown RBP13.35□□□□□ -0.27
SKA3-204ENST00000462482 ZNF587Q96SQ5 575 aaPredicted RBP13.35□□□□□ -0.27
SKA3-204ENST00000462482 EPYCQ99645 322 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 PTDSS2Q9BVG9 487 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 C19orf24Q9BVV8 132 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 CRLF2Q9HC73 371 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 NOX1Q9Y5S8 564 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 NUP214P35658 2090 aaPredicted RBP13.35□□□□□ -0.27
SKA3-204ENST00000462482 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
SKA3-204ENST00000462482 SH3PXD2BA1X283 911 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 ZNF432O94892 652 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 ETS2P15036 469 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 IFNGR1P15260 489 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 PCMT1P22061 227 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 GRPRP30550 384 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 PRKAR1BP31321 381 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 WDR4P57081 412 aaKnown RBP13.34□□□□□ -0.27
SKA3-204ENST00000462482 HGFACQ04756 655 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 ADRM1Q16186 407 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 CR1LQ2VPA4 569 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 ALG10BQ5I7T1 473 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 HPS1Q92902 700 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 SLC47A1Q96FL8 570 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 ASPNQ9BXN1 380 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 TMEM27Q9HBJ8 222 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 POFUT2Q9Y2G5 429 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 CMAHPQ9Y471 501 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 CORINQ9Y5Q5 1042 aa13.34□□□□□ -0.27
SKA3-204ENST00000462482 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 A0A1B0GWA3 101 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 PRORSD1PA6NEY8 169 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 ZNF726A6NNF4 738 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 ZNF99A8MXY4 864 aaPredicted RBP13.33□□□□□ -0.28
SKA3-204ENST00000462482 M0R3G1 203 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 NUDT7P0C024 238 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 CD79AP11912 226 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 PPIBP23284 216 aaKnown RBP13.33□□□□□ -0.28
SKA3-204ENST00000462482 GIFP27352 417 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 APEX1P27695 318 aaKnown RBP13.33□□□□□ -0.28
SKA3-204ENST00000462482 LSP1P33241 339 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 EGR4Q05215 589 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 SNTB2Q13425 540 aaKnown RBP13.33□□□□□ -0.28
SKA3-204ENST00000462482 TRMT5Q32P41 509 aaKnown RBP13.33□□□□□ -0.28
SKA3-204ENST00000462482 GCNT6Q5T4J0 391 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 CARD17Q5XLA6 110 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 KRT80Q6KB66 452 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 ULK3Q6PHR2 472 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 MDP1Q86V88 176 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 ZNF786Q8N393 782 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 C10orf53Q8N6V4 93 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 LSMEM1Q8N8F7 131 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 LINC01356Q8N9X3 169 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 ADPRHL1Q8NDY3 354 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 OR9I1Q8NGQ6 314 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 UBASH3BQ8TF42 649 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 GTF2H4Q92759 462 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 MAL2Q969L2 176 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 TAAR8Q969N4 342 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 OR2M2Q96R28 347 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 DOK1Q99704 481 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 SEC61A2Q9H9S3 476 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
SKA3-204ENST00000462482 LOC102725191A0A1B0GVB3 256 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 CELA3BP08861 270 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 ADRA2AP08913 450 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 BMP2P12643 396 aa13.32□□□□□ -0.28
SKA3-204ENST00000462482 CBLP22681 906 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms