RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ACTL6AO96019 429 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 KRT6AP02538 564 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SERPIND1P05546 499 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ICAM2P13598 275 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ABOP16442 354 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 CXCR2P25025 360 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 HTR1EP28566 365 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OTX1P32242 354 aaPredicted RBP2.15□□□□□ -2.07
HDAC6-212ENST00000461608 RDXP35241 583 aaKnown RBP2.15□□□□□ -2.07
HDAC6-212ENST00000461608 APOC4P55056 127 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 STX17P56962 302 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 FBXW4P57775 412 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF763Q0D2J5 394 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 GK3PQ14409 553 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 VPS26BQ4G0F5 336 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 RAET1LQ5VY80 246 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 BBS5Q8N3I7 341 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 FBXL16Q8N461 479 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 VN1R2Q8NFZ6 395 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OR52K2Q8NGK3 314 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OR10G9Q8NGN4 311 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 FGF11Q92914 225 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SLC38A4Q969I6 547 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 MCUR1Q96AQ8 359 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 HSFY1Q96LI6 401 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF578Q96N58 590 aaPredicted RBP2.15□□□□□ -2.07
HDAC6-212ENST00000461608 TSNARE1Q96NA8 513 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OR8B4Q96RC9 309 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 PANX2Q96RD6 677 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SORT1Q99523 831 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 TMEM246Q9BRR3 403 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 PELOQ9BRX2 385 aaKnown RBP2.15□□□□□ -2.07
HDAC6-212ENST00000461608 OR11A1Q9GZK7 315 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 ACTR6Q9GZN1 396 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 DEFB127Q9H1M4 99 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 RAB20Q9NX57 234 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 QPCTLQ9NXS2 382 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SHPKQ9UHJ6 478 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 STARD10Q9Y365 291 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 SLC25A15Q9Y619 301 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 CDHR2Q9BYE9 1310 aa2.15□□□□□ -2.07
HDAC6-212ENST00000461608 A0A075B6Q4 140 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 NSG1A0A0A6YYJ2 146 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SMCO3A2RU48 225 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 PSMB11A5LHX3 300 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 A8MUA0 341 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TCP11X1B4DZS4 312 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SLC31A2O15432 143 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CST1P01037 141 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 HPNP05981 417 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 KITLGP21583 273 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CHMLP26374 656 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 RRM2P31350 389 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 FOXN2P32314 431 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TFPI2P48307 235 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SH3BGRP55822 239 aaPredicted RBP2.14□□□□□ -2.07
HDAC6-212ENST00000461608 NUP107P57740 925 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 MRPS22P82650 360 aaKnown RBP2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SRSF5Q13243 272 aaKnown RBP2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CUL2Q13617 745 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 GPNMBQ14956 572 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TGFBIQ15582 683 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF79Q15937 498 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 XKR7Q5GH72 579 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SPANXN2Q5MJ10 180 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CARD17Q5XLA6 110 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TRIM40Q6P9F5 258 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CENPQQ7L2Z9 268 aaPredicted RBP2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CAMK2N1Q7Z7J9 78 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CEND1Q8N111 149 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 C6orf223Q8N319 242 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF740Q8NDX6 193 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 OR2L3Q8NG85 312 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 OR7G2Q8NG99 324 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 OR4F6Q8NGB9 312 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 OR1N2Q8NGR9 330 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 OR9G1Q8NH87 305 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 DCUN1D4Q92564 292 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 FGF14Q92915 247 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SMARCD2Q92925 531 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 CMTM7Q96FZ5 175 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 C12orf42Q96LP6 360 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TECTBQ96PL2 329 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 FMO2Q99518 471 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 TSG101Q99816 390 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 NAT9Q9BTE0 207 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 FAIM2Q9BWQ8 316 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 SIAEQ9HAT2 523 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 LY9Q9HBG7 655 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 MMP26Q9NRE1 261 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF256Q9Y2P7 627 aaPredicted RBP2.14□□□□□ -2.07
HDAC6-212ENST00000461608 FRMPD3Q5JV73 1810 aa2.14□□□□□ -2.07
HDAC6-212ENST00000461608 IGKV1D-8A0A087WSZ0 117 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 TRBV11-1A0A0K0K1C0 115 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 A8MU10 97 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 C12orf77C9JDV5 145 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FOXE1O00358 373 aaPredicted RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 CCL21O00585 134 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FAM189A1O60320 539 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 ERLIN1O75477 346 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms