RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 PRR23AA6NEV1 266 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 A8MXK9 166 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 OR2J3O76001 311 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 AP2A1O95782 977 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 IGHG4P01861 327 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SERPINB2P05120 415 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SERPIND1P05546 499 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 KITLGP21583 273 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MSR1P21757 451 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CMA1P23946 247 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 HMGCLP35914 325 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LONP1P36776 959 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 IRF8Q02556 426 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 PUDPQ08623 228 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TRDNQ13061 729 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 PNOCQ13519 176 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LY6DQ14210 128 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MRPL23Q16540 153 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 WHAMMP3Q1A5X7 153 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 C17orf58Q2M2W7 97 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TMEM30BQ3MIR4 351 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 GLYR1Q49A26 553 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 TEX44Q53QW1 395 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 VWA2Q5GFL6 755 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 C1orf220Q5T0J3 134 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LIN9Q5TKA1 542 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SPECC1LQ69YQ0 1117 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 FBXL22Q6P050 247 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 EMBQ6PCB8 327 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 FAM199XQ6PEV8 388 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 LINC00523Q86TU6 105 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 HPS6Q86YV9 775 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MICU2Q8IYU8 434 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 GABRG1Q8N1C3 465 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SLC35F6Q8N357 371 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 CSGALNACT2Q8N6G5 542 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 PQLC3Q8N755 202 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 LILRB4Q8NHJ6 448 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ADAMTS16Q8TE57 1224 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TRUB1Q8WWH5 349 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 UBE2E3Q969T4 207 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 NUS1Q96E22 293 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SLC45A3Q96JT2 553 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 SERAC1Q96JX3 654 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ATP6V1G3Q96LB4 118 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 C9orf85Q96MD7 179 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 PANX2Q96RD6 677 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MBOAT4Q96T53 435 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 TM2D1Q9BX74 207 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 RHBGQ9H310 441 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 BOLA2Q9H3K6 86 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 ELOVL6Q9H5J4 265 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 C8orf33Q9H7E9 229 aaPredicted RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 EXOSC3Q9NQT5 275 aaKnown RBP2.38□□□□□ -2.03
HPS3-203ENST00000460822 INPP5EQ9NRR6 644 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 EHFQ9NZC4 300 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 MTCH1Q9NZJ7 389 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 PDE10AQ9Y233 779 aa2.38□□□□□ -2.03
HPS3-203ENST00000460822 OVOS2A0A0G2JMS6 1433 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 USP6P35125 1406 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ANKARQ7Z5J8 1434 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 MYH4Q9Y623 1939 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 IGHV2-70DA0A0C4DH43 119 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 A0A1B0GTH9 108 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ZNF879B4DU55 563 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 EIF3HO15372 352 aaKnown RBP eCLIP2.37□□□□□ -2.03
HPS3-203ENST00000460822 PRKYO43930 277 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 TGM6O95932 706 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 P04436 131 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 CD55P08174 381 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 UMPSP11172 480 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 BCL3P20749 454 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SERPINA2P20848 420 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 GSTM3P21266 225 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 UGT1A4P22310 534 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 CD80P33681 288 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 HSD17B2P37059 387 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 MAP3K8P41279 467 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 OR1D4P47884 311 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ALDH3B2P48448 385 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 PRKXP51817 358 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ARHGDIBP52566 201 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 PAX5Q02548 391 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 CD300CQ08708 224 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SLC10A1Q14973 349 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ABRAXAS2Q15018 415 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 TRIM16LQ309B1 348 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 HNRNPA1L2Q32P51 320 aaKnown RBP2.37□□□□□ -2.03
HPS3-203ENST00000460822 HSP90AA4PQ58FG1 418 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 C9orf66Q5T8R8 295 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 MEDAGQ5VYS4 303 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SLC22A10Q63ZE4 541 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 SLC47A2Q86VL8 602 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 TPRA1Q86W33 373 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 OR2L13Q8N349 312 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 CATSPER1Q8NEC5 780 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 BEST4Q8NFU0 473 aa2.37□□□□□ -2.03
HPS3-203ENST00000460822 ACMSDQ8TDX5 336 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms