RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CSPG4Q6UVK1 2322 aa16.54■□□□□ 0.24
COL5A1-203ENST00000460264 SLC43A1O75387 559 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 HPRP00739 348 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 VIMP08670 466 aaKnown RBP16.53■□□□□ 0.24
COL5A1-203ENST00000460264 TTKP33981 857 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 CRYBA2P53672 197 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 SH3BGRP55822 239 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-203ENST00000460264 IL1RL1Q01638 556 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 TNK1Q13470 666 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 VEZF1Q14119 521 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 CLEC12BQ2HXU8 276 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 VMACQ2NL98 169 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 KRTAP21-3Q3LHN1 58 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 INTS11Q5TA45 600 aaKnown RBP16.53■□□□□ 0.24
COL5A1-203ENST00000460264 AGAP6Q5VW22 663 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 C11orf71Q6IPW1 123 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 HMBOX1Q6NT76 420 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 SCAIQ8N9R8 606 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 OR4D11Q8NGI4 311 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 LRRC58Q96CX6 371 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 OR2M2Q96R28 347 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 ASPNQ9BXN1 380 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 NELFAQ9H3P2 528 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 FKRPQ9H9S5 495 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 CR1P17927 2039 aa16.53■□□□□ 0.24
COL5A1-203ENST00000460264 CPSF4LA6NMK7 179 aaKnown RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 BBIP1A8MTZ0 92 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ATP6V1G2-DDX39BF2Z307 99 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MS4A18H0YCH9 400 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 RPL36A-HNRNPH2H7BZ11 118 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MRASO14807 208 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 CHP2O43745 196 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 AKAP8O43823 692 aaKnown RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 NDUFS7O75251 213 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 NQO1P15559 274 aaKnown RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MS4A18Q3C1V0 323 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MMEL1Q495T6 779 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 REP15Q6BDI9 236 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ANKRD16Q6P6B7 361 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 LINC00114Q6XXX2 140 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 WDR88Q6ZMY6 472 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 CALHM3Q86XJ0 350 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 RBM45Q8IUH3 476 aaKnown RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 UEVLDQ8IX04 471 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 TMEM123Q8N131 208 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 FBXL14Q8N1E6 418 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ANKK1Q8NFD2 765 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 OR8J3Q8NGG0 315 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 VANGL1Q8TAA9 524 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MAGEE2Q8TD90 523 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 CCDC134Q9H6E4 229 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 CBLN4Q9NTU7 201 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 MRPL39Q9NYK5 338 aaKnown RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 GDF2Q9UK05 429 aaPredicted RBP16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ALPK2Q86TB3 2170 aa16.52■□□□□ 0.24
COL5A1-203ENST00000460264 ARPC4-TTLL3A0A0A6YYG9 625 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 LRRN3E7EW58 273 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 LYPD3O95274 346 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 NPPAP01160 153 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 THY1P04216 161 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 ACVR1BP36896 505 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 FABP6P51161 128 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 PMS2P3Q13401 168 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 MAPRE2Q15555 327 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 ZNF544Q6NX49 715 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 CCDC80Q76M96 950 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 TSPYL5Q86VY4 417 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-203ENST00000460264 SNX32Q86XE0 403 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 MUC15Q8N387 334 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 GPR137CQ8N3F9 429 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 C10orf53Q8N6V4 93 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 PIK3C3Q8NEB9 887 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 SLC26A7Q8TE54 656 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 ADAMTS16Q8TE57 1224 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 HS6ST2Q96MM7 605 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 CACNG6Q9BXT2 260 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 PCDHAC1Q9H158 963 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 BARX1Q9HBU1 254 aaPredicted RBP16.51■□□□□ 0.23
COL5A1-203ENST00000460264 GPR35Q9HC97 309 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 ATP23Q9Y6H3 246 aa16.51■□□□□ 0.23
COL5A1-203ENST00000460264 A0A096LPE4 126 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 IGHV1-18A0A0C4DH31 117 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 A0A1W2PPZ6 126 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 TRAPPC13A5PLN9 417 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 MT-ATP6P00846 226 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 HLA-DOBP13765 273 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 UBE2NP61088 152 aaKnown RBP16.5■□□□□ 0.23
COL5A1-203ENST00000460264 TUBA1BP68363 451 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 TUBA4AP68366 448 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 ARF1P84077 181 aaKnown RBP16.5■□□□□ 0.23
COL5A1-203ENST00000460264 POU3F1Q03052 451 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-203ENST00000460264 PUDPQ08623 228 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 NHLRC1Q6VVB1 395 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 DNM1P46Q6ZS02 220 aa16.5■□□□□ 0.23
COL5A1-203ENST00000460264 TUBA1AQ71U36 451 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms