RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MKRN2Q9H000 416 aaKnown RBP13.61□□□□□ -0.23
PTPRU-205ENST00000460170 GALNT9Q9HCQ5 603 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 VSTM5A8MXK1 200 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 FABP7O15540 132 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 SCRG1O75711 98 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 SLC2A10O95528 541 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 C3orf33Q6P1S2 294 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 GDPD3Q7L5L3 318 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 FBXL6Q8N531 539 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 SLC35B4Q969S0 331 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 AKIP1Q9NQ31 210 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 GLS2Q9UI32 602 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 NEU3Q9UQ49 428 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 PIGBOS1A0A0B4J2F0 54 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 YY2O15391 372 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 IFNA5P01569 189 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 C17orf67Q0P5P2 114 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 FCN2Q15485 313 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 MEP1BQ16820 701 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 SLC7A6Q92536 515 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 EIF5A2Q9GZV4 153 aaKnown RBP13.61□□□□□ -0.23
PTPRU-205ENST00000460170 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 NIPAL2Q9H841 368 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 COL4A5P29400 1685 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 FOCADQ5VW36 1801 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 A6NLC8 198 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 SELENOFO60613 162 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 ATP1B1P05026 303 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 GAAP10253 952 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF35P13682 527 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 HTR2CP28335 458 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 RHEBQ15382 184 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 COX15Q7KZN9 410 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 BAHD1Q8TBE0 780 aaPredicted RBP13.61□□□□□ -0.23
PTPRU-205ENST00000460170 PDCD1LG2Q9BQ51 273 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 RGCCQ9H4X1 137 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 C6orf106Q9H6K1 298 aaPredicted RBP13.61□□□□□ -0.23
PTPRU-205ENST00000460170 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
PTPRU-205ENST00000460170 CD160O95971 181 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 SRMP19623 302 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 METAP1P53582 386 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 FXYD4P59646 89 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 EEF1A2Q05639 463 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ASAH1Q13510 395 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 AGBL4Q5VU57 503 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 KLHDC8BQ8IXV7 354 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF709Q8N972 641 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 NUP214P35658 2090 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 TRABD2BA6NFA1 517 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 SULT1C4O75897 302 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 CD1CP29017 333 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 S100A2P29034 98 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 SELENOVP59797 346 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 TMEM176BQ3YBM2 270 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 CCL4L1Q8NHW4 92 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ELF4Q99607 663 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ZC3H12DA2A288 527 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 DVL2O14641 736 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 EVI2BP34910 448 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 RAE1P78406 368 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 NIPAL3Q6P499 406 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 SLC16A9Q7RTY1 509 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 CCDC71LQ8N9Z2 235 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ZNF436Q9C0F3 470 aaPredicted RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 SIRT5Q9NXA8 310 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 ETV7Q9Y603 341 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 A0A0A6YYH2 397 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 A6NJ64 397 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 KCNK2O95069 426 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 PAPLNO95428 1278 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 HLA-AP01891 365 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 PPP2CBP62714 309 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 PPP2CAP67775 309 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 EEF1A1P68104 462 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 GPLD1P80108 840 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 NKAIN2Q5VXU1 208 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 XAF1Q6GPH4 301 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 LIN7BQ9HAP6 207 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 MAP1BP46821 2468 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 A8MVM7 634 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 TNFRSF10AO00220 468 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 RACK1P63244 317 aaKnown RBP13.6□□□□□ -0.23
PTPRU-205ENST00000460170 FAPQ12884 760 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 OR13C9Q8NGT0 318 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 FCRL1Q96LA6 429 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 MMP17Q9ULZ9 603 aa13.6□□□□□ -0.23
PTPRU-205ENST00000460170 TRAPPC2P0DI81 140 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 TRAPPC2BP0DI82 140 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 CD27P26842 260 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 DDOSTP39656 456 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
PTPRU-205ENST00000460170 ULBP2Q9BZM5 246 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 NRSN2Q9GZP1 204 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 RBM38Q9H0Z9 239 aaKnown RBP13.59□□□□□ -0.23
PTPRU-205ENST00000460170 TMEM82A0PJX8 343 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 PPM1DO15297 605 aa13.59□□□□□ -0.23
PTPRU-205ENST00000460170 UNQ6126/PRO20091Q6UXV3 157 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms