RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 A0A1W2PPZ6 126 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 DPRXA6NFQ7 191 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 MS4A18H0YCH9 400 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 M0R3G1 203 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 ABCD4O14678 606 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 SEC14L2O76054 403 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 HIST1H2ABP04908 130 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 UGT2B15P54855 530 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 SELENOWP63302 87 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 TUBA1BP68363 451 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 TUBA4AP68366 448 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 ROR2Q01974 943 aaKnown RBP16.41■□□□□ 0.22
USP39-209ENST00000458268 MS4A18Q3C1V0 323 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 TUBA1AQ71U36 451 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 HIST3H2AQ7L7L0 130 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 NANOGNBQ7Z5D8 188 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 P2RY8Q86VZ1 359 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 LRRC17Q8N6Y2 441 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 FAM156AQ8NDB6 213 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 HIST1H2ACQ93077 130 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 MPP4Q96JB8 637 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 HSH2DQ96JZ2 352 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 FOXC2Q99958 501 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 SPAG4Q9NPE6 437 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 NANSQ9NR45 359 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 ARL8BQ9NVJ2 186 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 MRPL39Q9NYK5 338 aaKnown RBP16.41■□□□□ 0.22
USP39-209ENST00000458268 V9GYQ6 96 aa16.41■□□□□ 0.22
USP39-209ENST00000458268 RAI1Q7Z5J4 1906 aaPredicted RBP16.41■□□□□ 0.22
USP39-209ENST00000458268 ZNF726A6NNF4 738 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 NDUFAB1O14561 156 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 HS3ST1O14792 307 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 RNF13O43567 381 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 TRAF3IP2O43734 574 aaPredicted RBP16.4■□□□□ 0.22
USP39-209ENST00000458268 PIP5K1CO60331 668 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SMPD2O60906 423 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 GMNNO75496 209 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 OR5F1O95221 314 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 MT-ATP6P00846 226 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 IFNW1P05000 195 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 IFNA8P32881 189 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SLC25A3Q00325 362 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SPOCK1Q08629 439 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 CAMK2DQ13557 499 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 ZNF74Q16587 644 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 C8orf82Q6P1X6 216 aaPredicted RBP16.4■□□□□ 0.22
USP39-209ENST00000458268 KLHL17Q6TDP4 642 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 LINC00114Q6XXX2 140 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 C20orf204Q6ZNR8 217 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 LINGO2Q7L985 606 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SCAIQ8N9R8 606 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 RBM15BQ8NDT2 890 aaKnown RBP16.4■□□□□ 0.22
USP39-209ENST00000458268 ADPRHL1Q8NDY3 354 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 OR6S1Q8NH40 331 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 PERPQ96FX8 193 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 TXNDC15Q96J42 360 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 RADILQ96JH8 1075 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 PRSS27Q9BQR3 290 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SLC17A5Q9NRA2 495 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 TAGLN3Q9UI15 199 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 RCE1Q9Y256 329 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 SLC25A15Q9Y619 301 aa16.4■□□□□ 0.22
USP39-209ENST00000458268 HEATR1Q9H583 2144 aaKnown RBP16.4■□□□□ 0.22
USP39-209ENST00000458268 SLC35F4A4IF30 521 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 OR6C65A6NJZ3 312 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 BLOC1S5-TXNDC5H3BN57 136 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 J3KTA2 159 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 PDLIM1O00151 329 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 PLPP3O14495 311 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 CAPZA2P47755 286 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 CDH11P55287 796 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 UBE2NP61088 152 aaKnown RBP16.39■□□□□ 0.21
USP39-209ENST00000458268 MELKQ14680 651 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 TESK1Q15569 626 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 CEACAM16Q2WEN9 425 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 IFI44LQ53G44 452 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 SLC22A25Q6T423 547 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 SEZ6L2Q6UXD5 910 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 TMEM108Q6UXF1 575 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 PIK3C3Q8NEB9 887 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 OR1K1Q8NGR3 316 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 OR6N1Q8NGY5 312 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 TMEM171Q8WVE6 324 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 TMEM239Q8WW34 195 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 PIGTQ969N2 578 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 MUS81Q96NY9 551 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 ALPK1Q96QP1 1244 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 OR2M2Q96R28 347 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 LAMP3Q9UQV4 416 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 AMDHD2Q9Y303 409 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 NOX1Q9Y5S8 564 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 SNX13Q9Y5W8 968 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 CADP27708 2225 aa16.39■□□□□ 0.21
USP39-209ENST00000458268 MSX2P35548 267 aaPredicted RBP16.38■□□□□ 0.21
USP39-209ENST00000458268 BIDP55957 195 aa16.38■□□□□ 0.21
USP39-209ENST00000458268 PRPS1P60891 318 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms