RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 C1DQ13901 141 aaKnown RBP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 MELKQ14680 651 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 SLC17A1Q14916 467 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 SF3B4Q15427 424 aaKnown RBP eCLIP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CDSNQ15517 529 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 TRIP10Q15642 601 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 ZBED5Q49AG3 693 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CLEC12AQ5QGZ9 265 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 VWA1Q6PCB0 445 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 KLHL17Q6TDP4 642 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CREB3L2Q70SY1 520 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 HIPK1Q86Z02 1210 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 ZDHHC13Q8IUH4 622 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 EPHX4Q8IUS5 362 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 UEVLDQ8IX04 471 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 GALNT4Q8N4A0 578 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CBR4Q8N4T8 237 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 OR9K2Q8NGE7 335 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 OR6S1Q8NH40 331 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 MBD3L2Q8NHZ7 208 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 MAGEE2Q8TD90 523 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 RNF128Q8TEB7 428 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CCDC120Q96HB5 630 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 OXGR1Q96P68 337 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 DMRTA2Q96SC8 542 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 VKORC1Q9BQB6 163 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 PLA2G12AQ9BZM1 189 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 UCK2Q9BZX2 261 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 RNF122Q9H9V4 155 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 KRCC1Q9NPI7 259 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 MED29Q9NX70 200 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 PAQR5Q9NXK6 330 aaPredicted RBP7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 KIF17Q9P2E2 1029 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 B3GAT1Q9P2W7 334 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 MGAT4BQ9UQ53 548 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 SIGLEC7Q9Y286 467 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 TMEM5Q9Y2B1 443 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 B3GALT5Q9Y2C3 310 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 ZNF175Q9Y473 711 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 CORINQ9Y5Q5 1042 aa7.72□□□□□ -1.17
CLTCL1-204ENST00000458188 H3BN98 237 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SOCS2O14508 198 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 IMPA2O14732 288 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SMNDC1O75940 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ATP6V1G2O95670 118 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 PPP1R3DO95685 299 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 TP53P04637 393 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 YES1P07947 543 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 HOXD4P09016 255 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 IFNGR1P15260 489 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ZNF43P17038 809 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 BMP5P22003 454 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 FPR3P25089 353 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 UQCRC1P31930 480 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 PTGER4P35408 488 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 KIR2DL2P43627 348 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SELENOPP49908 381 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 BIDP55957 195 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 RUNX1T1Q06455 604 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 CAMK2DQ13557 499 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 MFSD13AQ14CX5 517 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 RFX4Q33E94 735 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ZIK1Q3SY52 487 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SLC36A3Q495N2 470 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ALG10Q5BKT4 473 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 TMEM201Q5SNT2 666 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 TMEM236Q5W0B7 351 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 GTF2IRD2BQ6EKJ0 949 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ABLIM2Q6H8Q1 611 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 TMEM211Q6ICI0 200 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 NIPAL3Q6P499 406 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 AAED1Q7RTV5 226 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 BTLAQ7Z6A9 289 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 GTF2IRD2Q86UP8 949 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 LINC00471Q8N535 108 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 IQCF1Q8N6M8 205 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 CLDN22Q8N7P3 220 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 SCAIQ8N9R8 606 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 OR8D4Q8NGM9 314 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 LIPHQ8WWY8 451 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 RND1Q92730 232 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 EME1Q96AY2 570 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 TM9SF2Q99805 663 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 DGCR6LQ9BY27 220 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 OPN3Q9H1Y3 402 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 OR52D1Q9H346 318 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 DCLRE1BQ9H816 532 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ZNF556Q9HAH1 456 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 INIPQ9NRY2 104 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 KLHL9Q9P2J3 617 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 REV1Q9UBZ9 1251 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 PRSS50Q9UI38 385 aa7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ERRFI1Q9UJM3 462 aaPredicted RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 ZNF346Q9UL40 294 aaKnown RBP7.71□□□□□ -1.18
CLTCL1-204ENST00000458188 RNF6Q9Y252 685 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms