RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 CYSLTR2Q9NS75 346 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 PIPOXQ9P0Z9 390 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 SLC17A6Q9P2U8 582 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 SEC14L4Q9UDX3 406 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 FZD4Q9ULV1 537 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 USP22Q9UPT9 525 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 B3GNT3Q9Y2A9 372 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 SNX24Q9Y343 169 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 MRPS18CQ9Y3D5 142 aaKnown RBP4.9□□□□□ -1.63
VPS41-209ENST00000457055 LRP12Q9Y561 859 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 TMEM56-RWDD3S4R434 201 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 ZSWIM8A7E2V4 1837 aa4.9□□□□□ -1.63
VPS41-209ENST00000457055 LOC105371242A0A075B767 164 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3BA6NDS4 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3FA6NER0 549 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 ADM5C9JUS6 153 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 USP17L23D6RBM5 183 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CLDN34H7C241 214 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CXCR6O00574 342 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 LATO43561 262 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 OR2J3O76001 311 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 RCBTB2O95199 551 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 ANKRD34CP0C6C1 535 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 IL7RP16871 459 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 HTR2CP28335 458 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SLC6A1P30531 599 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SSTR1P30872 391 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CCKBRP32239 447 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 AVPR1AP37288 418 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 RPL5P46777 297 aaKnown RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 SERPINB10P48595 397 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CLCN3P51790 818 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 ACLYP53396 1101 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 EEFSECP57772 596 aaKnown RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 ADORA2A-AS1P86434 159 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 IL5RAQ01344 420 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 BIKQ13323 160 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 APOFQ13790 326 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CALCRLQ16602 461 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TMEM176BQ3YBM2 270 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 C14orf28Q4W4Y0 310 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 PDZD11Q5EBL8 140 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CXorf66Q5JRM2 361 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 DNLZQ5SXM8 178 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SDHAF4Q5VUM1 108 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3GQ6DHY5 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 LRRC8EQ6NSJ5 796 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 UGT3A1Q6NUS8 523 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TEX38Q6PEX7 206 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TMPRSS11AQ6ZMR5 421 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 GRINAQ7Z429 371 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SATL1Q86VE3 508 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 GPBP1Q86WP2 473 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 RNF130Q86XS8 419 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 STHQ8IWL8 128 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 C2orf73Q8N5S3 287 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 EXD3Q8N9H8 876 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 CDRT4Q8N9R6 151 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 LRRC75AQ8NAA5 344 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 INO80EQ8NBZ0 244 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 ZNF738Q8NE65 137 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 OR2AP1Q8NGE2 309 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TMEM163Q8TC26 289 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 NUDCD2Q8WVJ2 157 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TMEM234Q8WY98 164 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 C11orf40Q8WZ69 217 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 OVCA2Q8WZ82 227 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SUSD6Q92537 303 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 ORAI1Q96D31 301 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 POM121L2Q96KW2 1035 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 AMDHD1Q96NU7 426 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 VAT1Q99536 393 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 WDR77Q9BQA1 342 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 EBF4Q9BQW3 602 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TRAF4Q9BUZ4 470 aaPredicted RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 BEX2Q9BXY8 128 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 COMMD4Q9H0A8 199 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 ARV1Q9H2C2 271 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 PIGMQ9H3S5 423 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 PLEKHA4Q9H4M7 779 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 POPDC2Q9HBU9 364 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 SMOXQ9NWM0 555 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 DDIT4Q9NX09 232 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 TESQ9UGI8 421 aaKnown RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 SLC12A6Q9UHW9 1150 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 RAB21Q9UL25 225 aa4.89□□□□□ -1.63
VPS41-209ENST00000457055 NDRG4Q9ULP0 352 aaKnown RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 FARSAQ9Y285 508 aaKnown RBP4.89□□□□□ -1.63
VPS41-209ENST00000457055 NME7Q9Y5B8 376 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms