RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 FXYD1O00168 92 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 CD8AP01732 235 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 PAX7P23759 505 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 ROR2Q01974 943 aaKnown RBP18.57■□□□□ 0.56
HMGB3-205ENST00000455596 LTBQ06643 244 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 NPTX1Q15818 432 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 MS4A18Q3C1V0 323 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 TBRG1Q3YBR2 411 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 CLEC9AQ6UXN8 241 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 LINGO2Q7L985 606 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 SNX32Q86XE0 403 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 CALHM3Q86XJ0 350 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 UEVLDQ8IX04 471 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 C10orf53Q8N6V4 93 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 SCAIQ8N9R8 606 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 PCYOX1LQ8NBM8 494 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 ADAMTS16Q8TE57 1224 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 DHRS9Q9BPW9 319 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 FKRPQ9H9S5 495 aa18.57■□□□□ 0.56
HMGB3-205ENST00000455596 LOC100653049A0A140TA62 436 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 KRT34O76011 436 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 SH3BGRP55822 239 aaPredicted RBP18.56■□□□□ 0.56
HMGB3-205ENST00000455596 UBE2NP61088 152 aaKnown RBP18.56■□□□□ 0.56
HMGB3-205ENST00000455596 ETFDHQ16134 617 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 ERICH5Q6P6B1 374 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 LINC00114Q6XXX2 140 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 GPR137CQ8N3F9 429 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 ANKK1Q8NFD2 765 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 OR4D11Q8NGI4 311 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 MOGAT1Q96PD6 335 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 ZNF317Q96PQ6 595 aaPredicted RBP18.56■□□□□ 0.56
HMGB3-205ENST00000455596 GID8Q9NWU2 228 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 MRPL39Q9NYK5 338 aaKnown RBP18.56■□□□□ 0.56
HMGB3-205ENST00000455596 CAPN7Q9Y6W3 813 aa18.56■□□□□ 0.56
HMGB3-205ENST00000455596 RPL36A-HNRNPH2H7BZ11 118 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 SMAD7O15105 426 aaKnown RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 TRAF3IP2O43734 574 aaPredicted RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 MT-ATP6P00846 226 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 TTKP33981 857 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 MDH1P40925 334 aaKnown RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 PMS2P3Q13401 168 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 VEZF1Q14119 521 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 ANKRD16Q6P6B7 361 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 TTC33Q6PID6 262 aaPredicted RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 B3GLCTQ6Y288 498 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 RBM45Q8IUH3 476 aaKnown RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 FBXL14Q8N1E6 418 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 PIK3C3Q8NEB9 887 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 MAGEE2Q8TD90 523 aaPredicted RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 BCL2L2Q92843 193 aaPredicted RBP18.55■□□□□ 0.56
HMGB3-205ENST00000455596 OR2M2Q96R28 347 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 CBLN4Q9NTU7 201 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 ATP23Q9Y6H3 246 aa18.55■□□□□ 0.56
HMGB3-205ENST00000455596 PLCE1Q9P212 2302 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 ARPC4-TTLL3A0A0A6YYG9 625 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 TRAPPC13A5PLN9 417 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 LRRN3E7EW58 273 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 SLC22A2O15244 555 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 HPRP00739 348 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 HOXB1P14653 301 aaPredicted RBP18.54■□□□□ 0.56
HMGB3-205ENST00000455596 FABP6P51161 128 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 CRYBA2P53672 197 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 POU3F1Q03052 451 aaPredicted RBP18.54■□□□□ 0.56
HMGB3-205ENST00000455596 PUDPQ08623 228 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 CLEC12BQ2HXU8 276 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 Q71RC1 249 aaPredicted RBP18.54■□□□□ 0.56
HMGB3-205ENST00000455596 MUC15Q8N387 334 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 C10orf82Q8WW14 230 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 PROX1Q92786 737 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 PCDHAC1Q9H158 963 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 GPR35Q9HC97 309 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 SLC7A7Q9UM01 511 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 NOX1Q9Y5S8 564 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 VPS13CQ709C8 3753 aa18.54■□□□□ 0.56
HMGB3-205ENST00000455596 A0A096LPE4 126 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 A0A1W2PPZ6 126 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 THY1P04216 161 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 HEXAP06865 529 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 HLA-DOBP13765 273 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 ZNF544Q6NX49 715 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 WDR88Q6ZMY6 472 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 TMEM123Q8N131 208 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 OR5J2Q8NH18 312 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 MPP4Q96JB8 637 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 HS6ST2Q96MM7 605 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 ZNF583Q96ND8 569 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 SLC38A2Q96QD8 506 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 NELFAQ9H3P2 528 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 CRLF2Q9HC73 371 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 BAG5Q9UL15 447 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 USP22Q9UPT9 525 aa18.53■□□□□ 0.56
HMGB3-205ENST00000455596 FAM220BPB1ANY3 271 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 PLPP3O14495 311 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 LYPD3O95274 346 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 LY6G6DO95868 133 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 IFNA14P01570 189 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 AHCYP23526 432 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 ARF1P84077 181 aaKnown RBP18.52■□□□□ 0.56
HMGB3-205ENST00000455596 CEACAM16Q2WEN9 425 aa18.52■□□□□ 0.56
HMGB3-205ENST00000455596 C11orf71Q6IPW1 123 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms