RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 MED29Q9NX70 200 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ASIC5Q9NY37 505 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF224Q9NZL3 707 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 METRNQ9UJH8 293 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PRDM4Q9UKN5 801 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PCDHGB1Q9Y5G3 927 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DSPPQ9NZW4 1301 aa5.15□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A8MVM7 634 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TYROBPO43914 113 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NPIPB7O75200 414 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC43A1O75387 559 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RP2O75695 350 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF432O94892 652 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AGR2O95994 175 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CLPTM1O96005 669 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SERPINE1P05121 402 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DBIP07108 87 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ERCC1P07992 297 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GAAP10253 952 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 UQCRBP14927 111 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CBR1P16152 277 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 COL8A2P25067 703 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GTF2E2P29084 291 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 EPHA3P29320 983 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GRPRP30550 384 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CRATP43155 626 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ETV4P43268 484 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CLK1P49759 484 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MVDP53602 400 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DVL1P1P54792 670 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SH3BGRP55822 239 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 POU3F1Q03052 451 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MVKQ03426 396 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IFFO1Q0D2I5 559 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C1DQ13901 141 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AWAT1Q58HT5 328 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WBP2NLQ6ICG8 309 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LRRC74BQ6ZQY2 392 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF621Q6ZSS3 439 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ABHD12BQ7Z5M8 362 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PEG10Q86TG7 708 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PEX5LQ8IYB4 626 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C10orf111Q8N326 155 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GPR137CQ8N3F9 429 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ICA1LQ8NDH6 482 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF540Q8NDQ6 660 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BHLHE22Q8NFJ8 381 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR4F15Q8NGB8 312 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FGFBP3Q8TAT2 258 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RNF217Q8TC41 542 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC38A5Q8WUX1 472 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HPS1Q92902 700 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TAAR8Q969N4 342 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MRPL24Q96A35 216 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MOGAT1Q96PD6 335 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR52E6Q96RD3 313 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SF3B5Q9BWJ5 86 aaKnown RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WDR55Q9H6Y2 383 aaPredicted RBP5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OBP2BQ9NPH6 170 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PNPOQ9NVS9 261 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DCAF16Q9NXF7 216 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 P2RX2Q9UBL9 471 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 REV1Q9UBZ9 1251 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LGALS13Q9UHV8 139 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 USP22Q9UPT9 525 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PPIAL4AQ9Y536 164 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CORINQ9Y5Q5 1042 aa5.14□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A1B0GWA3 101 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF99A8MXY4 864 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 B4DSR2 109 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FAAHO00519 579 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SDHDO14521 159 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SYNGR3O43761 229 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PNPP00491 289 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NQO1P15559 274 aaKnown RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF14P17017 642 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF43P17038 809 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LBPP18428 481 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NR4A1P22736 598 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AQP1P29972 269 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CLNS1AP54105 237 aaKnown RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 HILS1P60008 231 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DSTNP60981 165 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ABCE1P61221 599 aaKnown RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 COPZ1P61923 177 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 VSNL1P62760 191 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CCL8P80075 99 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAD2L1Q13257 205 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CAMK2DQ13557 499 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MPP2Q14168 576 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GNA13Q14344 377 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MELKQ14680 651 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RAB39AQ14964 217 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MFSD13AQ14CX5 517 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NKPD1Q17RQ9 610 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GSG1Q2KHT4 349 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SMU1Q2TAY7 513 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMEM255AQ5JRV8 349 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C6orf10Q5SRN2 563 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SPATA46Q5T0L3 261 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms