RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 ZNF716A6NP11 495 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 J3KTA2 159 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 TNFSF13O75888 250 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 OR7A10O76100 309 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 BGLAPP02818 100 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 FCGR1AP12314 374 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 NQO1P15559 274 aaKnown RBP7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ZNF43P17038 809 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 GRPRP30550 384 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 AGTR1P30556 359 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 RRM2P31350 389 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 YAP1P46937 504 aaKnown RBP7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ASCL1P50553 236 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 HMGA2P52926 109 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 UGT2B15P54855 530 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 PRKCDQ05655 676 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ZP4Q12836 540 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 PMS2P3Q13401 168 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 SLC17A1Q14916 467 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ZSCAN26Q16670 478 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 FGD3Q5JSP0 725 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 OR2T5Q6IEZ7 315 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ZFP1Q6P2D0 407 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 TMPRSS11FQ6ZWK6 438 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 HDDC2Q7Z4H3 204 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 NANOGNBQ7Z5D8 188 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 TSEN54Q7Z6J9 526 aaKnown RBP7.75□□□□□ -1.17
COL28A1-205ENST00000453441 PXKQ7Z7A4 578 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 GALNT5Q7Z7M9 940 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 CNEP1R1Q8N9A8 125 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 OR2T29Q8NH02 315 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 OR5J2Q8NH18 312 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ABHD3Q8WU67 409 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 CANT1Q8WVQ1 401 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ROBO4Q8WZ75 1007 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 TMEM45BQ96B21 275 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 INTS12Q96CB8 462 aaKnown RBP7.75□□□□□ -1.17
COL28A1-205ENST00000453441 SLC25A36Q96CQ1 311 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 BPIFA2Q96DR5 249 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 OXGR1Q96P68 337 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 CHID1Q9BWS9 393 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 REEP1Q9H902 201 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 PLSCR4Q9NRQ2 329 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 ELOVL5Q9NYP7 299 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 STX18Q9P2W9 335 aaKnown RBP7.75□□□□□ -1.17
COL28A1-205ENST00000453441 RCE1Q9Y256 329 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 NOX1Q9Y5S8 564 aa7.75□□□□□ -1.17
COL28A1-205ENST00000453441 RELNP78509 3460 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 A0A087WUU8 490 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ARRDC5A6NEK1 342 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 NPIPB13A6NJU9 1138 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 NPIPB4C9JG80 1138 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 PYCARD-AS1I3L0S3 204 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 TNFRSF11BO00300 401 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 HNRNPRO43390 633 aaKnown RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 FKBP6O75344 327 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 AKR7A3O95154 331 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 CH25HO95992 272 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ASAH2BP0C7U1 165 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 IFI30P13284 250 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 FUT1P19526 365 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 BMP5P22003 454 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 KIR2DL2P43627 348 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 P2RY4P51582 365 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ARHGDIAP52565 204 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 PRPS1P60891 318 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ACTR3P61158 418 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 SRSF1Q07955 248 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 PUDPQ08623 228 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 C1DQ13901 141 aaKnown RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 C1QTNF12Q5T7M4 302 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 PODNL1Q6PEZ8 512 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 BEND4Q6ZU67 534 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 SSX8Q7RTT4 187 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 SLC46A3Q7Z3Q1 461 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ABHD12BQ7Z5M8 362 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 KIF18BQ86Y91 864 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 CCDC71Q8IV32 467 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 NRMQ8IXM6 262 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 GCNT2Q8N0V5 402 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 TMEM99Q8N816 258 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 NAXEQ8NCW5 288 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 OR9K2Q8NGE7 335 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 SLC7A13Q8TCU3 470 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 APH1AQ96BI3 265 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 STARD4Q96DR4 205 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ALPK1Q96QP1 1244 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 FUZQ9BT04 418 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 MEPEQ9NQ76 525 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 ARMC1Q9NVT9 282 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 JKAMPQ9P055 326 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 RHCGQ9UBD6 479 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 DNAJB9Q9UBS3 223 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 HIF3AQ9Y2N7 669 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 NOSIPQ9Y314 301 aaKnown RBP7.74□□□□□ -1.17
COL28A1-205ENST00000453441 TESMINQ9Y4I5 508 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 LYVE1Q9Y5Y7 322 aa7.74□□□□□ -1.17
COL28A1-205ENST00000453441 USP9YO00507 2555 aaPredicted RBP7.73□□□□□ -1.17
COL28A1-205ENST00000453441 ANKHD1Q8IWZ3 2542 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms