RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 OR7A10O76100 309 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 CH25HO95992 272 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ADAP00813 363 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ITGA2P17301 1181 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 CRYGSP22914 178 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 IGHV1-2P23083 117 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 MAGEA2P43356 314 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
COL3A1-203ENST00000450867 TLE4Q04727 773 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 TRAP1Q12931 704 aaKnown RBP12.67□□□□□ -0.38
COL3A1-203ENST00000450867 PMS2P3Q13401 168 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 C1QTNF12Q5T7M4 302 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 C22orf34Q6ZV56 151 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 SSX8Q7RTT4 187 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 TMEM123Q8N131 208 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 KDM8Q8N371 416 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 SLC7A13Q8TCU3 470 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 PIP5K1AQ99755 562 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 LINC00470Q9BZP3 86 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 IL1RAPQ9NPH3 570 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 TAS2R5Q9NYW4 299 aa12.67□□□□□ -0.38
COL3A1-203ENST00000450867 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 NPIPB13A6NJU9 1138 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 NPIPB4C9JG80 1138 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 GYG2O15488 501 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 AKAP8O43823 692 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 ATP5HO75947 161 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 PDE5AO76074 875 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 THBDP07204 575 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 H1F0P07305 194 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 NQO1P15559 274 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 CBLP22681 906 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 SELENOPP49908 381 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 RPS4XP62701 263 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 PRKCDQ05655 676 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 CYP2R1Q6VVX0 501 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 UEVLDQ8IX04 471 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 C10orf53Q8N6V4 93 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 LRRC17Q8N6Y2 441 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 C1orf162Q8NEQ5 155 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 CLPTM1LQ96KA5 538 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 THTPAQ9BU02 230 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 MED18Q9BUE0 208 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 ACTR6Q9GZN1 396 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 MAGIXQ9H6Y5 334 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 TAS2R16Q9NYV7 291 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 RHCGQ9UBD6 479 aa12.66□□□□□ -0.38
COL3A1-203ENST00000450867 FAM32AQ9Y421 112 aaKnown RBP12.66□□□□□ -0.38
COL3A1-203ENST00000450867 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 RPL36A-HNRNPH2H7BZ11 118 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 hCG_2039718K7EN88 272 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 PIP5K1CO60331 668 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 DNAJC8O75937 253 aaPredicted RBP12.65□□□□□ -0.38
COL3A1-203ENST00000450867 FABP3P05413 133 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 ITGA5P08648 1049 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 FUT1P19526 365 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 CLDN17P56750 224 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL3A1-203ENST00000450867 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
COL3A1-203ENST00000450867 C1DQ13901 141 aaKnown RBP12.65□□□□□ -0.38
COL3A1-203ENST00000450867 SEZ6L2Q6UXD5 910 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 TMPRSS11FQ6ZWK6 438 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 NANOGNBQ7Z5D8 188 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 ABHD12BQ7Z5M8 362 aaPredicted RBP12.65□□□□□ -0.38
COL3A1-203ENST00000450867 P2RY8Q86VZ1 359 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 NRMQ8IXM6 262 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 S100PBPQ96BU1 408 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 BPIFA2Q96DR5 249 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 LRR1Q96L50 414 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 OR2M2Q96R28 347 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 RASSF1Q9NS23 344 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 ZNF226Q9NYT6 803 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
COL3A1-203ENST00000450867 HEATR1Q9H583 2144 aaKnown RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 AQP12BA6NM10 295 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 DEFB108AA8MXU0 73 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 SIAH2O43255 324 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 SLC43A1O75387 559 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 LYZL6O75951 148 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 IGHV3-9P01782 118 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HRGP04196 525 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HIST1H2ABP04908 130 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms