RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ATG4DQ86TL0 474 aaPredicted RBP15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 LINC00471Q8N535 108 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 PIK3IP1Q96FE7 263 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 DHRS1Q96LJ7 313 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 EPYCQ99645 322 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 TIGARQ9NQ88 270 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 CHRNA9Q9UGM1 479 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 EDARQ9UNE0 448 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 TMED7Q9Y3B3 224 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 SAMHD1Q9Y3Z3 626 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 ITPR3Q14573 2671 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 A0A087WUJ7 227 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 GJE1A6NN92 205 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 GOSR1O95249 250 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ATE1O95260 518 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF26P17031 533 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ENPP1P22413 925 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 AGTR1P30556 359 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 IFNGR2P38484 337 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 HMGA2P52926 109 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 FOXD4Q12950 439 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 GTF2IRD2BQ6EKJ0 949 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 HMBOX1Q6NT76 420 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 C3orf33Q6P1S2 294 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF730Q6ZMV8 503 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 NUFIP2Q7Z417 695 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 GTF2IRD2Q86UP8 949 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 TUSC5Q8IXB3 177 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 RNF113BQ8IZP6 322 aaKnown RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 OR52J3Q8NH60 311 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 RNF128Q8TEB7 428 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 SLC25A43Q8WUT9 341 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ACOT11Q8WXI4 607 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 CPNE4Q96A23 557 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 DDIT4LQ96D03 193 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 CNBD2Q96M20 576 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ALPK1Q96QP1 1244 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 CIB1Q99828 191 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 CXXC4Q9H2H0 198 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 GLRX2Q9NS18 164 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF226Q9NYT6 803 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 LYVE1Q9Y5Y7 322 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 FREM1Q5H8C1 2179 aa15.14■□□□□ 0.01
PRPF40A-204ENST00000450303 HTR3EA5X5Y0 456 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 DPPA5A6NC42 116 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 SAC3D1A6NKF1 404 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 VGLL3A8MV65 326 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 A8MVM7 634 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 DEFB108AA8MXU0 73 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF208O43345 1280 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 KLK2P20151 261 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 CCNA2P20248 432 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 FPR1P21462 350 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 CRYGSP22914 178 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 PCYT1AP49585 367 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 CLK1P49759 484 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 KRT80Q6KB66 452 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 LINC00114Q6XXX2 140 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 STAC2Q6ZMT1 411 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 FCRLAQ7L513 359 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 TSPYL5Q86VY4 417 aaPredicted RBP15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 ADGRG3Q86Y34 549 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 NKAIN4Q8IVV8 208 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 CDK20Q8IZL9 346 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 OR5K1Q8NHB7 308 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 STK35Q8TDR2 534 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM239Q8WW34 195 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 DNAJA3Q96EY1 480 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 NRBF2Q96F24 287 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 OR5B2Q96R09 309 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM43Q9BTV4 400 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 SLC19A3Q9BZV2 496 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 MED31Q9Y3C7 131 aa15.13■□□□□ 0.01
PRPF40A-204ENST00000450303 CCNB2O95067 398 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 LYPD3O95274 346 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 THY1P04216 161 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 THBDP07204 575 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 TFPIP10646 304 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM201Q5SNT2 666 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 C6orf52Q5T4I8 152 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 PODNL1Q6PEZ8 512 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 UGT2A3Q6UWM9 527 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 BEND4Q6ZU67 534 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 HIPK1Q86Z02 1210 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 SVOPLQ8N434 492 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF775Q96BV0 537 aaPredicted RBP15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 PRSS27Q9BQR3 290 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 MAN2C1Q9NTJ4 1040 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 NDUFA13Q9P0J0 144 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 U3KQV3 271 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 MAP1AP78559 2803 aaPredicted RBP15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 PRR14LQ5THK1 2151 aa15.12■□□□□ 0.01
PRPF40A-204ENST00000450303 TMEM72A0PK05 275 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 ZNF23P17027 643 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 CD53P19397 219 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 RNPS1Q15287 305 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 TSC22D1Q15714 1073 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 DEFB113Q30KQ7 82 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 ALKBH2Q6NS38 261 aa15.11■□□□□ 0.01
PRPF40A-204ENST00000450303 MBOAT2Q6ZWT7 520 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms