RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR14A2Q96R54 314 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 CNTNAP3Q9BZ76 1288 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SPATC1LQ9H0A9 340 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 LMAN2LQ9H0V9 348 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 UBQLN3Q9H347 655 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 C1orf198Q9H425 327 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 CACFD1Q9UGQ2 172 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SLC35A3Q9Y2D2 325 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TMEM184BQ9Y519 407 aaPredicted RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 PLXNA3P51805 1871 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 DNAH12Q6ZR08 3092 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 CPED1A4D0V7 1026 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 FAM86C2PA6NEL3 165 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 J3QL48 77 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SAP18O00422 153 aaKnown RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 MFNGO00587 321 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SMAD9O15198 467 aaKnown RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 KDELR3O43731 214 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 OR10H2O60403 315 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 NTN1O95631 604 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 IFNA17P01571 189 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 FGBP02675 491 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 MRPL3P09001 348 aaKnown RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 CSF1P09603 554 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 OR4E1P0C645 316 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SLC2A1P11166 492 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TIMP2P16035 220 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 GPR4P46093 362 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TTC3P53804 2025 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 ATP1B3P54709 279 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 CLDN12P56749 244 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TAS2R41P59536 307 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 STXBP1P61764 594 aaKnown RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 SRSF4Q08170 494 aaKnown RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 CNTN1Q12860 1018 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 FOXC1Q12948 553 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 BIKQ13323 160 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 GAMTQ14353 236 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 RSU1Q15404 277 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 SURF2Q15527 256 aaPredicted RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 SYPL1Q16563 259 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 ZNF620Q6ZNG0 422 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 VRK3Q8IV63 474 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 UBAC2Q8NBM4 344 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 OR6K2Q8NGY2 324 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 OR6X1Q8NH79 312 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 BBS10Q8TAM1 723 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 KISS1RQ969F8 398 aaPredicted RBP7.91□□□□□ -1.14
LSM5-208ENST00000450169 HAVCR1Q96D42 359 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 MED8Q96G25 268 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TWSG1Q9GZX9 223 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 METTL9Q9H1A3 318 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 ANKRD10Q9NXR5 420 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TAS2R8Q9NYW2 309 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 LPAR3Q9UBY5 353 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 ST6GALNAC2Q9UJ37 374 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 TIMM10BQ9Y5J6 103 aa7.91□□□□□ -1.14
LSM5-208ENST00000450169 A0A0G2JLL6 359 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 F8VVB4 439 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 F8VWA3 439 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 H7C417 338 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 BRINP1O60477 761 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 CNMDO75829 334 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 KLHL18O94889 574 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 EPPINO95925 133 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 CD14P08571 375 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 FAM157CP0CG43 387 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 GSK3AP49840 483 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 SLC16A1P53985 500 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 LSM6P62312 80 aaKnown RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 CDC42EP1Q00587 391 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 KIAA0141Q14154 515 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 PPA1Q15181 289 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 OR8G1Q15617 311 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 NKPD1Q17RQ9 610 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 ZNF750Q32MQ0 723 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 AWAT1Q58HT5 328 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 DNLZQ5SXM8 178 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 PIP5KL1Q5T9C9 394 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 ATPAF1Q5TC12 328 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 LIPNQ5VXI9 398 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 PAPD4Q6PIY7 484 aaKnown RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 DHRS11Q6UWP2 260 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 DRAM2Q6UX65 266 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 DNM1P46Q6ZS02 220 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 PRRT2Q7Z6L0 340 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 HMGN2P46Q86SG4 172 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 C1QL4Q86Z23 238 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 MMP21Q8N119 569 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 FAM24BQ8N5W8 94 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 ZNF433Q8N7K0 673 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 PPTC7Q8NI37 304 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 TGM7Q96PF1 710 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 GFI1Q99684 422 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 SULT4A1Q9BR01 284 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 PAAF1Q9BRP4 392 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 SUCNR1Q9BXA5 334 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms