RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ZNF471Q9BX82 626 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 MS4A8Q9BY19 250 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 SEC11CQ9BY50 192 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 THAP10Q9P2Z0 257 aaPredicted RBP12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 PISDQ9UG56 409 aa12.38□□□□□ -0.43
SYNGAP1-204ENST00000449372 FARS2O95363 451 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 AGAP20933 346 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 MPIP34949 423 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PRKAG1P54619 331 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 TAS2R38P59533 333 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 LINC00303Q3SY05 128 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 FNDC3BQ53EP0 1204 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR52W1Q6IF63 320 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM184AQ6ZMB5 413 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR4D9Q8NGE8 314 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 GCDHQ92947 438 aaPredicted RBP12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 NUS1Q96E22 293 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PRSS16Q9NQE7 514 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 CA14Q9ULX7 337 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 NPFFR2Q9Y5X5 522 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 HMGN4O00479 90 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 CLDN4O14493 209 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 FMO6PO60774 539 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PNLIPRP2P54317 469 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 RPS26P62854 115 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PDGFRLQ15198 375 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 DECR1Q16698 335 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PGGHGQ32M88 737 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 PIP5KL1Q5T9C9 394 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 FAAP20Q6NZ36 180 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 WDR13Q9H1Z4 485 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR2AG1Q9H205 316 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF780BQ9Y6R6 833 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 EYSQ5T1H1 3165 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 COL4A2P08572 1712 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 CD2P06729 351 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 SDHAP31040 664 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 P2RY2P41231 377 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 HS6ST2Q96MM7 605 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 SMAD5Q99717 465 aaKnown RBP12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
SYNGAP1-204ENST00000449372 A0A0D9SG52 128 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 CXorf65A6NEN9 183 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 M0R3H8 397 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 EMC8O43402 210 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 CLEC3AO75596 197 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 DRD3P35462 400 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 RPP30P78346 268 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 NCMAPQ5T1S8 102 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 ADAMTS15Q8TE58 950 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 HIST1H2BAQ96A08 127 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 EXOGQ9Y2C4 368 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 BTBD17A6NE02 478 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 RIIAD1A6NNX1 92 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 SHHQ15465 462 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 PYY3Q5JQD4 70 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 MRGPREQ86SM8 312 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 AMZ2Q86W34 360 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 ZNF671Q8TAW3 534 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 CPNE2Q96FN4 548 aaPredicted RBP12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 SH2B3Q9UQQ2 575 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 AP4M1O00189 453 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 SLC35G4P0C7Q5 338 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 GJA4P35212 333 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 EFNB1P98172 346 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR2AK2Q8NG84 335 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 APOBEC4Q8WW27 367 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 FGF11Q92914 225 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 MARS2Q96GW9 593 aaKnown RBP12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 CLCC1Q96S66 551 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 ORAI3Q9BRQ5 295 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 SOX7Q9BT81 388 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 CERS4Q9HA82 394 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
SYNGAP1-204ENST00000449372 A0A0G2JK05 382 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 PPIHO43447 177 aaKnown RBP12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 KLHL18O94889 574 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 GKN3PP0CG01 181 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 TSSK4Q6SA08 328 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 CEACAM19Q7Z692 300 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR4Q3Q8NH05 313 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 OR2L2Q8NH16 312 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 TFGQ92734 400 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 RAB3CQ96E17 227 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 TSPAN10Q9H1Z9 355 aaPredicted RBP12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 TMEM138Q9NPI0 162 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 UQCC1Q9NVA1 299 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 RFPL4AA6NLU0 287 aa12.35□□□□□ -0.43
SYNGAP1-204ENST00000449372 RFPL4AL1F8VTS6 287 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms