RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 UPK3AO75631 287 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 WNT1P04628 370 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 CCR4P51679 360 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 CCR6P51684 374 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 HES5Q5TA89 166 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 THOC7Q6I9Y2 204 aaKnown RBP15.41■□□□□ 0.06
TOM1-210ENST00000449058 NUP54Q7Z3B4 507 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 TIGD4Q8IY51 512 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 IZUMO1Q8IYV9 350 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 FAM160A2Q8N612 972 aaPredicted RBP15.41■□□□□ 0.06
TOM1-210ENST00000449058 SLC46A1Q96NT5 459 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.41■□□□□ 0.06
TOM1-210ENST00000449058 NDEL1Q9GZM8 345 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 SOHLH2Q9NX45 425 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 MRM2Q9UI43 246 aaKnown RBP15.41■□□□□ 0.06
TOM1-210ENST00000449058 CEP290O15078 2479 aa15.41■□□□□ 0.06
TOM1-210ENST00000449058 TLCD2A6NGC4 264 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ERVH48-1M5A8F1 160 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ABHD16AO95870 558 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 MT-ND4P03905 459 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 TACSTD2P09758 323 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 NME1P15531 152 aaKnown RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 GDNFP39905 211 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 MAGEB1P43366 347 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 SNTB2Q13425 540 aaKnown RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 GSG1Q2KHT4 349 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 PHF21AQ96BD5 680 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 TGM7Q96PF1 710 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 PDE7BQ9NP56 450 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 STMN3Q9NZ72 180 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 PCDH15Q96QU1 1955 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 SPTBN5Q9NRC6 3674 aaKnown RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 BRWD1Q9NSI6 2320 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 A0A087WV48 116 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 TMEM72A0PK05 275 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ITGA10O75578 1167 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 H2AFB2P0C5Z0 115 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 OR8G3PP0DMU2 310 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 HTR2BP41595 481 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 RPL18Q07020 188 aaKnown RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 ZNF767PQ75MW2 155 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 C17orf82Q86X59 251 aaPredicted RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 GKN2Q86XP6 184 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 CDC20BQ86Y33 519 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ZNF687Q8N1G0 1237 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 C17orf50Q8WW18 174 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 RLN3Q8WXF3 142 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 SNAPC3Q92966 411 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 KTI12Q96EK9 354 aaPredicted RBP15.4■□□□□ 0.06
TOM1-210ENST00000449058 KLHDC3Q9BQ90 382 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ZFP64Q9NPA5 681 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 ING4Q9UNL4 249 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 V9GY05 133 aa15.4■□□□□ 0.06
TOM1-210ENST00000449058 COL5A1P20908 1838 aaPredicted RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 FRG2CA6NGY1 282 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 DCTN6O00399 190 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 F13BP05160 661 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ZNF24P17028 368 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 GPLD1P80108 840 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 GRM7Q14831 915 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 LIPNQ5VXI9 398 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 MTFR2Q6P444 385 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 LMX1AQ8TE12 382 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ADAM19Q9H013 955 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 TSPAN10Q9H1Z9 355 aaPredicted RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 C12orf10Q9HB07 376 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 PNO1Q9NRX1 252 aaKnown RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 MMACHCQ9Y4U1 282 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 IGKV3-11P04433 115 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ANXA3P12429 323 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 RORAP35398 523 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 GNG2P59768 71 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ALKBH1Q13686 389 aaKnown RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 ANGPT1Q15389 498 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 Q499Y3 187 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 MESTQ5EB52 335 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 SYT13Q7L8C5 426 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 FAM220AQ7Z4H9 259 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 TMEM151BQ8IW70 566 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ZNF433Q8N7K0 673 aaPredicted RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 OR56B4Q8NH76 319 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 CLIP3Q96DZ5 547 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 LCORQ96JN0 433 aaPredicted RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 ADAD1Q96M93 576 aaKnown RBP15.39■□□□□ 0.05
TOM1-210ENST00000449058 TSPAN32Q96QS1 320 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 MRI1Q9BV20 369 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 ACTR6Q9GZN1 396 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 LIN7BQ9HAP6 207 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 FRRS1LQ9P0K9 344 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 GRHPRQ9UBQ7 328 aa15.39■□□□□ 0.05
TOM1-210ENST00000449058 IGKV3D-11A0A0A0MRZ8 115 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 TRBV5-5A0A0J9YX44 114 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 A0A1W2PR77 199 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 ZNF593O00488 134 aaPredicted RBP15.38■□□□□ 0.05
TOM1-210ENST00000449058 CXCL3P19876 107 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 MAOBP27338 520 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 TACR3P29371 465 aa15.38■□□□□ 0.05
TOM1-210ENST00000449058 RPL6Q02878 288 aaKnown RBP15.38■□□□□ 0.05
TOM1-210ENST00000449058 FCRLAQ7L513 359 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms