RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LEG1Q6P5S2 330 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 EGFL6Q8IUX8 553 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ESX1Q8N693 406 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 LSM14AQ8ND56 463 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF248Q8NDW4 579 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ATP6V1C2Q8NEY4 427 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 OR10G3Q8NGC4 313 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 OR2T4Q8NH00 348 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TM9SF4Q92544 642 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 RASD2Q96D21 266 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 C1GALT1C1Q96EU7 318 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 Q96M85 177 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 KCTD7Q96MP8 289 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 NMNAT3Q96T66 252 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 DDOQ99489 341 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 POTEKPQ9BYX7 375 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 NXF2Q9GZY0 626 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 GALNT9Q9HCQ5 603 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 INIPQ9NRY2 104 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 MED11Q9P086 117 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 CRNNQ9UBG3 495 aaPredicted RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TCFL5Q9UL49 500 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 FARSAQ9Y285 508 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TRDV1A0A1B0GX56 115 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ZC3H12DA2A288 527 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 XKRYO14609 159 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 RNF13O43567 381 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 FOXD2O60548 495 aaPredicted RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 HPP00738 406 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 IL1AP01583 271 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 GAAP10253 952 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 CLUP10909 449 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TGFBR1P36897 503 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 OPRL1P41146 370 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 EIF1P41567 113 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 CASP3P42574 277 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 CENPAP49450 140 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 RORCP51449 518 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 RUNX1T1Q06455 604 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TUBA3EQ6PEY2 450 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 CD200R1LQ6Q8B3 271 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 RPS19BP1Q86WX3 136 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ARMC10Q8N2F6 343 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SYS1Q8N2H4 156 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TMEM99Q8N816 258 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SCAIQ8N9R8 606 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 OR4K17Q8NGC6 315 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 MFSD8Q8NHS3 518 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 HAVCR2Q8TDQ0 301 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 HPS1Q92902 700 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 ZNF524Q96C55 264 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC25A36Q96CQ1 311 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 MNTQ99583 582 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SH3GL3Q99963 347 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 KLHDC3Q9BQ90 382 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 MED18Q9BUE0 208 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 PTDSS2Q9BVG9 487 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 GPR87Q9BY21 358 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 B3GNT4Q9C0J1 378 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 KCNN2Q9H2S1 579 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 TXNL4BQ9NX01 149 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 MRPL39Q9NYK5 338 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 B3GNT3Q9Y2A9 372 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 SF3B6Q9Y3B4 125 aaKnown RBP9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 PEX16Q9Y5Y5 336 aa9.56□□□□□ -0.88
VIPAS39-203ENST00000448935 USP34Q70CQ2 3546 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 A0A075B6Q4 140 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 A0A087WZY1 265 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 OR6C68A6NDL8 312 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 C21orf140B9A014 251 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 IGHMP01871 453 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 F13BP05160 661 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 GYPBP06028 91 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 MRPL3P09001 348 aaKnown RBP9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 CELP19835 753 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 ADH6P28332 368 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 PTGDSP41222 190 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 BLVRAP53004 296 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 SPEM2Q0P670 501 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 ZP4Q12836 540 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 DOC2BQ14184 412 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 CSRP2Q16527 193 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 GXYLT1Q4G148 440 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 OR5M10Q6IEU7 315 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 C16orf87Q6PH81 154 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 B3GLCTQ6Y288 498 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 KLBQ86Z14 1044 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC35F2Q8IXU6 374 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 TMEM156Q8N614 296 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 SUMF1Q8NBK3 374 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 OR2M3Q8NG83 312 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 CT55Q8WUE5 264 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 SLC25A43Q8WUT9 341 aaPredicted RBP9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 ZMYND19Q96E35 227 aaPredicted RBP9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 TSPAN32Q96QS1 320 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 TBX5Q99593 518 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 ALG12Q9BV10 488 aa9.55□□□□□ -0.88
VIPAS39-203ENST00000448935 SPRY4Q9C004 299 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms