RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 C17orf78Q8N4C9 275 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 KBTBD8Q8NFY9 601 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 BOD1Q96IK1 185 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 TPD52L3Q96J77 140 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 MPP4Q96JB8 637 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 OR2M2Q96R28 347 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 ZNF426Q9BUY5 554 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 RCE1Q9Y256 329 aa11.17□□□□□ -0.62
PRPF40A-203ENST00000448428 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 M0R1B8 84 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 ABCD4O14678 606 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 CH25HO95992 272 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 CD99P14209 185 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 NUDT2P50583 147 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 PRPS1P60891 318 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 FOXD4Q12950 439 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 PIN1Q13526 163 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 ZNF74Q16587 644 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 ZNF672Q499Z4 452 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 HIKESHIQ53FT3 197 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 KLHL17Q6TDP4 642 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 TMEM108Q6UXF1 575 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 DEF8Q6ZN54 512 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 PIGWQ7Z7B1 504 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 NKAIN4Q8IVV8 208 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 WDFY1Q8IWB7 410 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 TMEM123Q8N131 208 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 LRRC75A-AS1Q8N1F1 130 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 OR1K1Q8NGR3 316 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 OR5J2Q8NH18 312 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 BCL2L2Q92843 193 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 ALKBH3Q96Q83 286 aaPredicted RBP11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 EMC6Q9BV81 110 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 RIMS3Q9UJD0 308 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 AMDHD2Q9Y303 409 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 HIVEP1P15822 2718 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 ARID1AO14497 2285 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 CELSR1Q9NYQ6 3014 aa11.16□□□□□ -0.62
PRPF40A-203ENST00000448428 C11orf98E9PRG8 122 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 RPL36A-HNRNPH2H7BZ11 118 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 CXCR6O00574 342 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 KPNA4O00629 521 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 GSTA4O15217 222 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SLC43A1O75387 559 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SOD3P08294 240 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 DANCRP0C864 163 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 ADORA3P0DMS8 318 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 AHCYP23526 432 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PTAFRP25105 342 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 CD40P25942 277 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PRDX6P30041 224 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 GSK3BP49841 420 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 TAS2R41P59536 307 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PSME3P61289 254 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 ROR2Q01974 943 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PUDPQ08623 228 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SPOCK1Q08629 439 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 TBRG1Q3YBR2 411 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PHYHD1Q5SRE7 291 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 C1QTNF12Q5T7M4 302 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SHEQ5VZ18 495 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PXKQ7Z7A4 578 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 GPR137CQ8N3F9 429 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SMAP2Q8WU79 429 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 FBXW5Q969U6 566 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 PERPQ96FX8 193 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 SLC19A3Q9BZV2 496 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 ALG2Q9H553 416 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 FKRPQ9H9S5 495 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 GPR35Q9HC97 309 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 MEPEQ9NQ76 525 aaPredicted RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 NANSQ9NR45 359 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 MED29Q9NX70 200 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 TAS2R5Q9NYW4 299 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 CISD1Q9NZ45 108 aaKnown RBP11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 MGAT4BQ9UQ53 548 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 LAMP3Q9UQV4 416 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 NOX1Q9Y5S8 564 aa11.15□□□□□ -0.62
PRPF40A-203ENST00000448428 ITPR3Q14573 2671 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 A0A096LPE4 126 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 SLC35F4A4IF30 521 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 ARHGEF9O43307 516 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 SERPINI2O75830 405 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 OR5F1O95221 314 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 WNT11O96014 354 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 ASAH2BP0C7U1 165 aa11.14□□□□□ -0.63
PRPF40A-203ENST00000448428 PAX1P15863 534 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms