RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CCDC190Q86UF4 302 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC22A16Q86VW1 577 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 MISPQ8IVT2 679 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 KDM8Q8N371 416 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZBTB44Q8NCP5 570 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 HPS1Q92902 700 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 HGDQ93099 445 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 MED18Q9BUE0 208 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PPP4R1LQ9P1A2 415 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 COMMD3Q9UBI1 195 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 PPIEQ9UNP9 301 aaKnown RBP8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 COPS3Q9UNS2 423 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC6A5Q9Y345 797 aa8.63□□□□□ -1.03
COL6A4P1-201ENST00000446690 WDR87Q6ZQQ6 2873 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 A0A1W2PPK0 400 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SHISA3A0PJX4 238 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 TVP23AA6NH52 213 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 DCTN6O00399 190 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 AHSA1O95433 338 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 RCVRNP35243 200 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PSMB10P40306 273 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPR50Q13585 617 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ISXQ2M1V0 245 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC35D3Q5M8T2 416 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM69AQ5T7M9 428 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM27D1Q5T7N8 215 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 AGAP7PQ5VUJ5 663 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PLEKHG7Q6ZR37 379 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 NUP54Q7Z3B4 507 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 CEACAM19Q7Z692 300 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 LYSMD2Q8IV50 215 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 POC5Q8NA72 575 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ABHD4Q8TB40 342 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC22A8Q8TCC7 542 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ASB15Q8WXK1 588 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 THAP4Q8WY91 577 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 GHSRQ92847 366 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 CMKLR1Q99788 373 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 COQ7Q99807 217 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PTDSS2Q9BVG9 487 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 NMNAT2Q9BZQ4 307 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SYT4Q9H2B2 425 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 KCNN2Q9H2S1 579 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 WDR54Q9H977 334 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZDBF2Q9HCK1 2354 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ASCC3Q8N3C0 2202 aaKnown RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 IQCMA0A1B0GVH7 501 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ANKUB1A6NFN9 424 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 B4DXG7 233 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM47E-STBD1D6RA91 191 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 XKRYO14609 159 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ADAM10O14672 748 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PLPP2O43688 288 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 GPANK1O95872 356 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 RENP00797 406 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 MT-ATP6P00846 226 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 TFPIP10646 304 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PRKCAP17252 672 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 IL11P20809 199 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 F8A1P23610 371 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 AZGP1P25311 298 aaKnown RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SHC1P29353 583 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 GBX2P52951 348 aaPredicted RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 CLDN6P56747 220 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 TAS2R43P59537 309 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACTA2P62736 377 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ACTG2P63267 376 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 GGTLC2Q14390 218 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 INPP5JQ15735 1006 aaPredicted RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZNF181Q2M3W8 571 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZMAT1Q5H9K5 638 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 OTPQ5XKR4 325 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 SLC6A19Q695T7 634 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PM20D2Q8IYS1 436 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR6V1Q8N148 313 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR13C5Q8NGS8 318 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 OR8K3Q8NH51 312 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 AP3S1Q92572 193 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PELI1Q96FA3 418 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 DIRAS2Q96HU8 199 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 ADAD1Q96M93 576 aaKnown RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 FOXN4Q96NZ1 517 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 RASL10BQ96S79 203 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 PPIL3Q9H2H8 161 aaKnown RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 AKAP7Q9P0M2 348 aaPredicted RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 NCDNQ9UBB6 729 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 NXT1Q9UKK6 140 aaKnown RBP8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 B3GALT1Q9Y5Z6 326 aa8.62□□□□□ -1.03
COL6A4P1-201ENST00000446690 TRBV2A0A0J9YWF9 115 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 LNP1A1A4G5 178 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 H3BML4 177 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 MASP2O00187 686 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 HLA-DQA2P01906 255 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 OPN1LWP04000 364 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 UMODP07911 640 aa8.61□□□□□ -1.03
COL6A4P1-201ENST00000446690 APEHP13798 732 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms