RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC47A1Q96FL8 570 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 SORCS2Q96PQ0 1159 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 ZNF607Q96SK3 696 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 KCNK17Q96T54 332 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 VRK1Q99986 396 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 PRR14Q9BWN1 585 aa18.3■□□□□ 0.52
VSX1-206ENST00000444511 RSPO3Q9BXY4 272 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 TESQ9UGI8 421 aaKnown RBP18.3■□□□□ 0.52
VSX1-206ENST00000444511 ANK3Q12955 4377 aaKnown RBP18.29■□□□□ 0.52
VSX1-206ENST00000444511 IGKV1D-42A0A075B6H8 117 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 EVPLLA8MZ36 301 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 B9A039 149 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 TPST1O60507 370 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 PDE5AO76074 875 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 IGLV1-44P01699 117 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 OR4A8P0C604 315 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 NQO1P15559 274 aaKnown RBP18.29■□□□□ 0.52
VSX1-206ENST00000444511 SLC6A2P23975 617 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 AGKQ53H12 422 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 CYB5R2Q6BCY4 276 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 FAM169BQ8N8A8 192 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 OR4F15Q8NGB8 312 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 DYDC1Q8WWB3 177 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 OR2M2Q96R28 347 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 TMEM38AQ9H6F2 299 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 TMEM27Q9HBJ8 222 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 GPR35Q9HC97 309 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 SLC52A3Q9NQ40 469 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 KLHL14Q9P2G3 628 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 CDC42EP3Q9UKI2 254 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 GMEB1Q9Y692 573 aa18.29■□□□□ 0.52
VSX1-206ENST00000444511 HEATR1Q9H583 2144 aaKnown RBP18.29■□□□□ 0.52
VSX1-206ENST00000444511 TRBV5-3A0A0A0MS03 114 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 SERPINB7O75635 380 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 CBR1P16152 277 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 AQP1P29972 269 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 LSM11P83369 360 aaKnown RBP eCLIP18.28■□□□□ 0.52
VSX1-206ENST00000444511 MFSD13AQ14CX5 517 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 ADIPOQQ15848 244 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 CARTPTQ16568 116 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 CEACAM16Q2WEN9 425 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 UEVLDQ8IX04 471 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 ADPRHL1Q8NDY3 354 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 BHLHE22Q8NFJ8 381 aaPredicted RBP18.28■□□□□ 0.52
VSX1-206ENST00000444511 EPYCQ99645 322 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 PIMREGQ9BSJ6 248 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 IKZF5Q9H5V7 419 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 SEC61A2Q9H9S3 476 aa18.28■□□□□ 0.52
VSX1-206ENST00000444511 ATRQ13535 2644 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 LOC102725191A0A1B0GVB3 256 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 NDUFS8O00217 210 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 TRAF3IP2O43734 574 aaPredicted RBP18.27■□□□□ 0.52
VSX1-206ENST00000444511 IGHV4-31P0DP07 118 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 GPX2P18283 190 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 CALCRP30988 508 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 CAPZA2P47755 286 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 ATP4BP51164 291 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 IDH3GP51553 393 aaPredicted RBP18.27■□□□□ 0.52
VSX1-206ENST00000444511 GGTLC2Q14390 218 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 SQLEQ14534 574 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 OR1Q1Q15612 314 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 EFNB3Q15768 340 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 RANBP3LQ86VV4 465 aaPredicted RBP18.27■□□□□ 0.52
VSX1-206ENST00000444511 ARMC8Q8IUR7 673 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 TMEM123Q8N131 208 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 ANKS4BQ8N8V4 417 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 HIPK4Q8NE63 616 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 OR6S1Q8NH40 331 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 ATP6V1G3Q96LB4 118 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 ASPNQ9BXN1 380 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 CORINQ9Y5Q5 1042 aa18.27■□□□□ 0.52
VSX1-206ENST00000444511 FBN1P35555 2871 aaKnown RBP18.26■□□□□ 0.51
VSX1-206ENST00000444511 A0A087WUJ7 227 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 RNF212BA8MTL3 300 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 VSTM5A8MXK1 200 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 M0R3G1 203 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 CELA3BP08861 270 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 FAM157CP0CG43 387 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 ZNF16P17020 682 aaPredicted RBP18.26■□□□□ 0.51
VSX1-206ENST00000444511 ARR3P36575 388 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 NPRL3Q12980 569 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 CARD17Q5XLA6 110 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 CCDC36Q8IYA8 594 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 C10orf53Q8N6V4 93 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 NUP37Q8NFH4 326 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 ZNF837Q96EG3 531 aaPredicted RBP18.26■□□□□ 0.51
VSX1-206ENST00000444511 BEX2Q9BXY8 128 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 PLK3Q9H4B4 646 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 RABEP2Q9H5N1 569 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 EVA1AQ9H8M9 152 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 MYOZ1Q9NP98 299 aaPredicted RBP18.26■□□□□ 0.51
VSX1-206ENST00000444511 TMEM160Q9NX00 188 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 ANGPT4Q9Y264 503 aa18.26■□□□□ 0.51
VSX1-206ENST00000444511 A0A0B4J2E0 115 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 A0A1B0GX12 115 aa18.25■□□□□ 0.51
VSX1-206ENST00000444511 ZNF99A8MXY4 864 aaPredicted RBP18.25■□□□□ 0.51
VSX1-206ENST00000444511 VWC2LB2RUY7 222 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms