RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 THBDP07204 575 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 CHRM4P08173 479 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 UMPSP11172 480 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 IDH2P48735 452 aaKnown RBP7.77□□□□□ -1.17
USP6NL-203ENST00000443016 MS4A2Q01362 244 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 IL1RL1Q01638 556 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 LARS2Q15031 903 aaKnown RBP7.77□□□□□ -1.17
USP6NL-203ENST00000443016 TSC22D1Q15714 1073 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 STK11Q15831 433 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 RPS26P11Q5JNZ5 115 aaPredicted RBP7.77□□□□□ -1.17
USP6NL-203ENST00000443016 ZFP1Q6P2D0 407 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 C20orf204Q6ZNR8 217 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 ZNF100Q8IYN0 542 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 ATG16L2Q8NAA4 619 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 WDR60Q8WVS4 1066 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 ADAM19Q9H013 955 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 DENND2DQ9H6A0 471 aaPredicted RBP7.77□□□□□ -1.17
USP6NL-203ENST00000443016 CTPS2Q9NRF8 586 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 DSPPQ9NZW4 1301 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 FREM1Q5H8C1 2179 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
USP6NL-203ENST00000443016 JMJD1CQ15652 2540 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 DHRS12A0PJE2 317 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 PRAMEF27A3QJZ7 478 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 AGAP5A6NIR3 686 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 SMAD9O15198 467 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 BCAS1O75363 584 aaPredicted RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 DBIP07108 87 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 FESP07332 822 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 FKBP2P26885 142 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 HOXC12P31275 282 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ITGADQ13349 1161 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 P2RY6Q15077 328 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ZSWIM7Q19AV6 140 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 LIN52Q52LA3 116 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 FAM98BQ52LJ0 330 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CYBRD1Q53TN4 286 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 SFRP5Q5T4F7 317 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 SHEQ5VZ18 495 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ZNF704Q6ZNC4 412 aaPredicted RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 GABRG1Q8N1C3 465 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 UBE2J2Q8N2K1 259 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ZNF540Q8NDQ6 660 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 FAM71CQ8NEG0 241 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CNOT9Q92600 299 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 PROX1Q92786 737 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 PERPQ96FX8 193 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 SLC38A1Q9H2H9 487 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 YY1AP1Q9H869 796 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 BCO1Q9HAY6 547 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 EXOSC3Q9NQT5 275 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 DCAF13Q9NV06 445 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 EMC3Q9P0I2 261 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 NSD1Q96L73 2696 aaPredicted RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 TRAV20A0A0B4J274 112 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CLOCKO15516 846 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 PRODHO43272 600 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CYTIPO60759 359 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 FKBP6O75344 327 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 LYZL6O75951 148 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 C8BP07358 591 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 THBS1P07996 1170 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 NID1P14543 1247 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ELF3P78545 371 aaPredicted RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CHRNB3Q05901 458 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 Q5PR19 223 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 Q6ZT83 130 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CBLL1Q75N03 491 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 OR52P1PQ8NH57 321 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 HSD17B8Q92506 261 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 TPD52L3Q96J77 140 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ARL5BQ96KC2 179 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ZNF300Q96RE9 604 aaPredicted RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 OR11A1Q9GZK7 315 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 OR10A4Q9H209 315 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 ESRP2Q9H6T0 727 aaKnown RBP7.76□□□□□ -1.17
USP6NL-203ENST00000443016 MAGIXQ9H6Y5 334 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 EVA1AQ9H8M9 152 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 HDGFL3Q9Y3E1 203 aa7.76□□□□□ -1.17
USP6NL-203ENST00000443016 CADP27708 2225 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 M0QX08 132 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 GCM2O75603 506 aaPredicted RBP7.75□□□□□ -1.17
USP6NL-203ENST00000443016 OPN1SWP03999 348 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 PRKAR1BP31321 381 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 OR2B6P58173 313 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 COPZ1P61923 177 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 CCNIQ14094 377 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 TAB1Q15750 504 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 MAJINQ3KP22 176 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 IFI44LQ53G44 452 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 ZNF311Q5JNZ3 666 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 MRPL2Q5T653 305 aaKnown RBP7.75□□□□□ -1.17
USP6NL-203ENST00000443016 SLC22A25Q6T423 547 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 TMEM171Q8WVE6 324 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 GEMIN6Q8WXD5 167 aaKnown RBP7.75□□□□□ -1.17
USP6NL-203ENST00000443016 DDIT4LQ96D03 193 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 MUCL1Q96DR8 90 aa7.75□□□□□ -1.17
USP6NL-203ENST00000443016 SLC47A1Q96FL8 570 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 315.9 ms