RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TXNDC15Q96J42 360 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 ZNF347Q96SE7 839 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 CHID1Q9BWS9 393 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 ENKD1Q9H0I2 346 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 FANCFQ9NPI8 374 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 AURKCQ9UQB9 309 aa14.18□□□□□ -0.14
USP39-205ENST00000442708 ALPK2Q86TB3 2170 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 MRPL33O75394 65 aaKnown RBP14.17□□□□□ -0.14
USP39-205ENST00000442708 ADORA3P0DMS8 318 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 CD79BP40259 229 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 GPR4P46093 362 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 OMPP47874 163 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 SELENOPP49908 381 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 FOXG1P55316 489 aaPredicted RBP14.17□□□□□ -0.14
USP39-205ENST00000442708 CLDN17P56750 224 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 IL1RL1Q01638 556 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 ZP4Q12836 540 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 LAPTM4AQ15012 233 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 STAC2Q6ZMT1 411 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 AAED1Q7RTV5 226 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 ZNF100Q8IYN0 542 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 GABRG1Q8N1C3 465 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 OR4K5Q8NGD3 323 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 OR4C15Q8NGM1 316 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 GPA33Q99795 319 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 LYVE1Q9Y5Y7 322 aa14.17□□□□□ -0.14
USP39-205ENST00000442708 BLOC1S5-TXNDC5H3BN57 136 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 ZNF432O94892 652 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 HIST1H2ABP04908 130 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 POU2F1P14859 743 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 ZNF26P17031 533 aaPredicted RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 ZNF43P17038 809 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 AHCYP23526 432 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 AQP2P41181 271 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 HMGA2P52926 109 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 SMIM11AP58511 58 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 POU3F1Q03052 451 aaPredicted RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 RPL18Q07020 188 aaKnown RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 TSC22D1Q15714 1073 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 TSPO2Q5TGU0 170 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 C1orf146Q5VVC0 180 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 OR2T5Q6IEZ7 315 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 MEX3BQ6ZN04 569 aaKnown RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 BEND4Q6ZU67 534 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 C22orf34Q6ZV56 151 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 TMPRSS11FQ6ZWK6 438 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 HIST3H2AQ7L7L0 130 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 NANOGNBQ7Z5D8 188 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 PXKQ7Z7A4 578 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 CXorf67Q86X51 503 aaPredicted RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 UEVLDQ8IX04 471 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 DMRTC2Q8IXT2 367 aaPredicted RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 PAPD5Q8NDF8 572 aaKnown RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 OR13C2Q8NGS9 318 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 OR2T29Q8NH02 315 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 HIST1H2ACQ93077 130 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 POP5Q969H6 163 aaKnown RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 APH1AQ96BI3 265 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 FAM46AQ96IP4 442 aaKnown RBP14.16□□□□□ -0.14
USP39-205ENST00000442708 ALPK1Q96QP1 1244 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 EMC6Q9BV81 110 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 SLC7A10Q9NS82 523 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 MED29Q9NX70 200 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 ELOVL5Q9NYP7 299 aa14.16□□□□□ -0.14
USP39-205ENST00000442708 PKDREJQ9NTG1 2253 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 TRAV27A0A087WT01 109 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 HTR3EA5X5Y0 456 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 EFCAB9A8MZ26 197 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 TNFRSF11BO00300 401 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 KLF4O43474 513 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 FKBP6O75344 327 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 SERPINI2O75830 405 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 ADAP00813 363 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 F13BP05160 661 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 UGT2B10P36537 528 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 RPS4XP62701 263 aaKnown RBP14.15□□□□□ -0.14
USP39-205ENST00000442708 C1DQ13901 141 aaKnown RBP14.15□□□□□ -0.14
USP39-205ENST00000442708 FBXW9Q5XUX1 488 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 ZNF787Q6DD87 383 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 NIPAL3Q6P499 406 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 Q6ZT83 130 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 LINGO2Q7L985 606 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 ZER1Q7Z7L7 766 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 STK32CQ86UX6 486 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 OR51A7Q8NH64 312 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 LINC01560Q8TB33 94 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 OR2M2Q96R28 347 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 CCM2LQ9NUG4 571 aaPredicted RBP14.15□□□□□ -0.14
USP39-205ENST00000442708 PARPBPQ9NWS1 579 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 FOXD3Q9UJU5 478 aaPredicted RBP14.15□□□□□ -0.14
USP39-205ENST00000442708 HIF3AQ9Y2N7 669 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 NOX1Q9Y5S8 564 aa14.15□□□□□ -0.14
USP39-205ENST00000442708 RNF13O43567 381 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 UPK3AO75631 287 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 KRT36O76013 467 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 OR6A2O95222 327 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 SAGP10523 405 aaPredicted RBP14.14□□□□□ -0.15
USP39-205ENST00000442708 IFNGR1P15260 489 aa14.14□□□□□ -0.15
USP39-205ENST00000442708 IGHV1-2P23083 117 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms