RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ZNF417Q8TAU3 575 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 SLC47A1Q96FL8 570 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 ZNF587Q96SQ5 575 aaPredicted RBP10.26□□□□□ -0.77
TTC28-203ENST00000442232 PTDSS2Q9BVG9 487 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 SHARPINQ9H0F6 387 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 RAB1BQ9H0U4 201 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 EVA1AQ9H8M9 152 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 TMEM27Q9HBJ8 222 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 ANGPT4Q9Y264 503 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 CHST2Q9Y4C5 530 aa10.26□□□□□ -0.77
TTC28-203ENST00000442232 A0A096LNT2 108 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 FTCDNL1E5RQL4 147 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 RPL36A-HNRNPH2H7BZ11 118 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 SERPINB7O75635 380 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 OR4A8P0C604 315 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CECR9P0C854 216 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 HNF1AP20823 631 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CBLP22681 906 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 GRPRP30550 384 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 ARR3P36575 388 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 PPOXP50336 477 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 LSM11P83369 360 aaKnown RBP eCLIP10.25□□□□□ -0.77
TTC28-203ENST00000442232 ARF1P84077 181 aaKnown RBP10.25□□□□□ -0.77
TTC28-203ENST00000442232 NPRL3Q12980 569 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 SCARB2Q14108 478 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CEACAM16Q2WEN9 425 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 IQCCQ4KMZ1 466 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 ARMC8Q8IUR7 673 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CCDC36Q8IYA8 594 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 C10orf53Q8N6V4 93 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 FAM169BQ8N8A8 192 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 LSMEM1Q8N8F7 131 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 ZNF540Q8NDQ6 660 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 ADPRHL1Q8NDY3 354 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 NANOS1Q8WY41 292 aaKnown RBP10.25□□□□□ -0.77
TTC28-203ENST00000442232 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 TAAR8Q969N4 342 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 ANKRD27Q96NW4 1050 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 SORCS2Q96PQ0 1159 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 RABEP2Q9H5N1 569 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CRLF2Q9HC73 371 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 GPR35Q9HC97 309 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 TMEM160Q9NX00 188 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CRNNQ9UBG3 495 aaPredicted RBP10.25□□□□□ -0.77
TTC28-203ENST00000442232 KCNS2Q9ULS6 477 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 USP22Q9UPT9 525 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 CORINQ9Y5Q5 1042 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 MXRA5Q9NR99 2828 aa10.25□□□□□ -0.77
TTC28-203ENST00000442232 LOC390937A0A1W2PQ73 354 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 LY6HO94772 140 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 APEHP13798 732 aaKnown RBP10.24□□□□□ -0.77
TTC28-203ENST00000442232 CBR1P16152 277 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 HOXB9P17482 250 aaPredicted RBP10.24□□□□□ -0.77
TTC28-203ENST00000442232 NPR2P20594 1047 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 HTR2AP28223 471 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 IDH3AP50213 366 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 IDH3GP51553 393 aaPredicted RBP10.24□□□□□ -0.77
TTC28-203ENST00000442232 AQP5P55064 265 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 POU3F1Q03052 451 aaPredicted RBP10.24□□□□□ -0.77
TTC28-203ENST00000442232 EGR4Q05215 589 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 PMS2P3Q13401 168 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 SQLEQ14534 574 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 CYP51A1Q16850 503 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 AGKQ53H12 422 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
TTC28-203ENST00000442232 CARD17Q5XLA6 110 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 FAM166AQ6J272 317 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 LINGO2Q7L985 606 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 HIPK4Q8NE63 616 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 NUP37Q8NFH4 326 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 IL17RDQ8NFM7 739 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 OR2M2Q96R28 347 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 TMEM38AQ9H6F2 299 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 SLC25A37Q9NYZ2 338 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 KLHL14Q9P2G3 628 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 SEC14L4Q9UDX3 406 aa10.24□□□□□ -0.77
TTC28-203ENST00000442232 DNHD1Q96M86 4753 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ZNF726A6NNF4 738 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ZNF99A8MXY4 864 aaPredicted RBP10.23□□□□□ -0.77
TTC28-203ENST00000442232 hCG_2039718K7EN88 272 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 M0R3G1 203 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 LMX1BO60663 402 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ZNF432O94892 652 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 IGKV3-15P01624 115 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 IGLV1-44P01699 117 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 AQP1P29972 269 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 NR4A2P43354 598 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ATP4BP51164 291 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 OR1Q1Q15612 314 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 EFNB3Q15768 340 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 ADIPOQQ15848 244 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 MST1LQ2TV78 715 aa10.23□□□□□ -0.77
TTC28-203ENST00000442232 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
TTC28-203ENST00000442232 SPATA21Q7Z572 469 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms