RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 BCL2L2Q92843 193 aaPredicted RBP16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 LRRC58Q96CX6 371 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 MOGAT1Q96PD6 335 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 MRGBPQ9NV56 204 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 FAIMQ9NVQ4 179 aa16.53■□□□□ 0.24
HMGB3P22-201ENST00000442010 ARPC4-TTLL3A0A0A6YYG9 625 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 FAM171A2A8MVW0 826 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 NDUFS7O75251 213 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 KRT33AO76009 404 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 WNT11O96014 354 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 IGHV4-39P01824 125 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 PTNP21246 168 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 CBLP22681 906 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 CYLC2Q14093 348 aaPredicted RBP16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 ETFDHQ16134 617 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 RABL3Q5HYI8 236 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 ENTPD8Q5MY95 495 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 AGAP6Q5VW22 663 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 REP15Q6BDI9 236 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 WDR88Q6ZMY6 472 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 RBM45Q8IUH3 476 aaKnown RBP16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 TMEM123Q8N131 208 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 SCAIQ8N9R8 606 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 ANKK1Q8NFD2 765 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 OR8J3Q8NGG0 315 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 MAGEE2Q8TD90 523 aaPredicted RBP16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 GTPBP3Q969Y2 492 aaKnown RBP16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 EPYCQ99645 322 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 PCDHAC1Q9H158 963 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 ALG2Q9H553 416 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 SELENONQ9NZV5 590 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 CORINQ9Y5Q5 1042 aa16.52■□□□□ 0.24
HMGB3P22-201ENST00000442010 CHD3Q12873 2000 aaKnown RBP16.52■□□□□ 0.23
HMGB3P22-201ENST00000442010 LRRN3E7EW58 273 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 SMAD7O15105 426 aaKnown RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 CHP2O43745 196 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 NPPAP01160 153 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 HLA-DOBP13765 273 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 ROR2Q01974 943 aaKnown RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 GUCY1A3Q02108 690 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 SF3A3Q12874 501 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 TNK1Q13470 666 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 CLEC12BQ2HXU8 276 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 INTS11Q5TA45 600 aaKnown RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 RNF217Q8TC41 542 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 OR2M2Q96R28 347 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 CBLN4Q9NTU7 201 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 MRPL39Q9NYK5 338 aaKnown RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 CRNNQ9UBG3 495 aaPredicted RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 GDF2Q9UK05 429 aaPredicted RBP16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 HIVEP2P31629 2446 aa16.51■□□□□ 0.23
HMGB3P22-201ENST00000442010 ANK3Q12955 4377 aaKnown RBP16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 IGHV1-18A0A0C4DH31 117 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 BBIP1A8MTZ0 92 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 SLC43A1O75387 559 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 SH3BGRP55822 239 aaPredicted RBP16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 C1DQ13901 141 aaKnown RBP16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 PHYHD1Q5SRE7 291 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 HMBOX1Q6NT76 420 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ZNF544Q6NX49 715 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ANKRD16Q6P6B7 361 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 KLHL24Q6TFL4 600 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 WDFY1Q8IWB7 410 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 DEPDC4Q8N2C3 294 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 MUC15Q8N387 334 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ADAMTS16Q8TE57 1224 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ZNF837Q96EG3 531 aaPredicted RBP16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ZNF583Q96ND8 569 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 SH3GL1Q99961 368 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 ZNF426Q9BUY5 554 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 GPR35Q9HC97 309 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 POU2F3Q9UKI9 436 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 USP22Q9UPT9 525 aa16.5■□□□□ 0.23
HMGB3P22-201ENST00000442010 CPSF4LA6NMK7 179 aaKnown RBP16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 ATP6V1G2-DDX39BF2Z307 99 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 PLPP3O14495 311 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 MRASO14807 208 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 VIMP08670 466 aaKnown RBP16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 HOXB1P14653 301 aaPredicted RBP16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 PAX7P23759 505 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 ACVR1BP36896 505 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 VEZF1Q14119 521 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 UEVLDQ8IX04 471 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 VANGL1Q8TAA9 524 aaPredicted RBP16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 TXNDC15Q96J42 360 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 SLC38A2Q96QD8 506 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 ASPNQ9BXN1 380 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 FKRPQ9H9S5 495 aa16.49■□□□□ 0.23
HMGB3P22-201ENST00000442010 A0A096LPE4 126 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 LOC100653049A0A140TA62 436 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 A0A1W2PPZ6 126 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 AKAP8O43823 692 aaKnown RBP16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 KRT34O76011 436 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 MT-ATP6P00846 226 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 IGLV1-44P01699 117 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 NQO1P15559 274 aaKnown RBP16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 FABP6P51161 128 aa16.48■□□□□ 0.23
HMGB3P22-201ENST00000442010 TUBA1BP68363 451 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms