RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ZNF773Q6PK81 442 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DHRS13Q6UX07 377 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TFAP2EQ6VUC0 442 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 GDPD3Q7L5L3 318 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CACUL1Q86Y37 369 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PGAM4Q8N0Y7 254 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR4M1Q8NGD0 313 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR13C5Q8NGS8 318 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR11L1Q8NGX0 322 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 WFIKKN2Q8TEU8 576 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DEDD2Q8WXF8 326 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ATOH1Q92858 354 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RPL3LQ92901 407 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SLC35C1Q96A29 364 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 C18orf25Q96B23 403 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 EXOSC8Q96B26 276 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BIRC7Q96CA5 298 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MARK4Q96L34 752 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MYADMQ96S97 322 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CSF3RQ99062 836 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PFDN5Q99471 154 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SORT1Q99523 831 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MAP3K3Q99759 626 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ADAM2Q99965 735 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 HOPXQ9BPY8 73 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CCDC3Q9BQI4 270 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DPH7Q9BTV6 452 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TRMT61BQ9BVS5 477 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CCDC90BQ9GZT6 254 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PPIL3Q9H2H8 161 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PPP1R3EQ9H7J1 279 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NIPAL2Q9H841 368 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 KRCC1Q9NPI7 259 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 EQTNQ9NQ60 294 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ANKRD10Q9NXR5 420 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF224Q9NZL3 707 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BTNL2Q9UIR0 455 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PPIAL4EA0A075B759 164 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TRBV11-1A0A0K0K1C0 115 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TMEM129A0AVI4 362 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF99A8MXY4 864 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 HACD1B0YJ81 288 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 LOC110117498-PIK3R3F6TDL0 507 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 M0R036 132 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 DFFAO00273 331 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 TFECO14948 347 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NBR2O15453 112 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ARPC5O15511 151 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SEMA7AO75326 666 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR2J3O76001 311 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 SEC24AO95486 1093 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ETHE1O95571 254 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 WNT11O96014 354 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 IFNA21P01568 189 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZDHHC11BP0C7U3 371 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PPIAL4FP0DN26 164 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ETFAP13804 333 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PRF1P14222 555 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ST6GAL1P15907 406 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NPR2P20594 1047 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 STOMP27105 288 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 LAP3P28838 519 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 AVPR1AP37288 418 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 YAP1P46937 504 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 GLUD2P49448 558 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PRKXP51817 358 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 AKR1D1P51857 326 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RABGGTBP53611 331 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 UBE2KP61086 200 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ABCE1P61221 599 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RBX1P62877 108 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BLOC1S1P78537 153 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 VLDLRP98155 873 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 BTN1A1Q13410 526 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF169Q14929 603 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 GPNMBQ14956 572 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 NEDD8Q15843 81 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 KCTD19Q17RG1 926 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RSPO4Q2I0M5 234 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PARP15Q460N3 678 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR2G6Q5TZ20 316 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MARC1Q5VT66 337 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 LYSMD4Q5XG99 296 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ELP2Q6IA86 826 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CES5AQ6NT32 575 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CYHR1Q6ZMK1 362 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 IL17RELQ6ZVW7 336 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 ZNF720Q7Z2F6 126 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 IRF2BP2Q7Z5L9 587 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 RNF130Q86XS8 419 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 PUSL1Q8N0Z8 303 aaKnown RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 Q8N402 240 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MFSD9Q8NBP5 474 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 CHDHQ8NE62 594 aaPredicted RBP5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 GJC3Q8NFK1 279 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 OR2L2Q8NH16 312 aa5.32□□□□□ -1.56
ALMS1-IT1-201ENST00000441587 MS4A10Q96PG2 267 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms