RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 GUCA2BQ16661 112 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 HYAL4Q2M3T9 481 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 TMPRSS11FQ6ZWK6 438 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 SYS1Q8N2H4 156 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 SLC2A12Q8TD20 617 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 DUX4Q9UBX2 424 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 CYB5R1Q9UHQ9 305 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 RPP14O95059 124 aaKnown RBP18.58■□□□□ 0.56
SHOX2-203ENST00000441443 FGF19O95750 216 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 RAB40ALP0C0E4 278 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 UBE2IP63279 158 aaKnown RBP18.58■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF234Q14588 700 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 AMZ1Q400G9 498 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 RPL13AP3Q6NVV1 102 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 LDLRAD3Q86YD5 345 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 RAB40AQ8WXH6 277 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 MIB2Q96AX9 1013 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 SDF2Q99470 211 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 PCBD2Q9H0N5 130 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF304Q9HCX3 659 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 LHX6Q9UPM6 363 aa18.58■□□□□ 0.56
SHOX2-203ENST00000441443 DUXAA6NLW8 204 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 CAPZA2P47755 286 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 RAB13P51153 203 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 MRPS10P82664 201 aaKnown RBP18.57■□□□□ 0.56
SHOX2-203ENST00000441443 PRDX1Q06830 199 aaKnown RBP18.57■□□□□ 0.56
SHOX2-203ENST00000441443 LRRC37A5PQ49AS3 106 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 SLC6A19Q695T7 634 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 KCNE5Q9UJ90 142 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 LRRK1Q38SD2 2015 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 SCN2AQ99250 2005 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 A0A1B0GVT2 93 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 RFPL4AA6NLU0 287 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 FAM171A2A8MVW0 826 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 PRSS44E7EML9 344 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 RFPL4AL1F8VTS6 287 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 GNB5O14775 395 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 EIF4E2O60573 245 aaKnown RBP18.57■□□□□ 0.56
SHOX2-203ENST00000441443 RPN2P04844 631 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 MGMTP16455 207 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 TNFRSF17Q02223 184 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 SCRN3Q0VDG4 424 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 FAM78AQ5JUQ0 283 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 OR2A1Q8NGT9 310 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 OR6K6Q8NGW6 343 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 C2CD4CQ8TF44 421 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 EXO5Q9H790 373 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 PRSS16Q9NQE7 514 aa18.57■□□□□ 0.56
SHOX2-203ENST00000441443 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 GLAP06280 429 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 UBBP0CG47 229 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 UBCP0CG48 685 aaKnown RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 ADRA2CP18825 462 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 FAUP35544 74 aaKnown RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 RPS27AP62979 156 aaKnown RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 UBA52P62987 128 aaKnown RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 ATXN7L3Q14CW9 347 aaPredicted RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 TMEM35AQ53FP2 167 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 STAC2Q6ZMT1 411 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 MOB3CQ70IA8 216 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 TMPRSS12Q86WS5 348 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 MNTQ99583 582 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 KLF15Q9UIH9 416 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 KCNK7Q9Y2U2 307 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 GLSO94925 669 aaPredicted RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 IFNGP01579 166 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 HNRNPA1L2Q32P51 320 aaKnown RBP18.56■□□□□ 0.56
SHOX2-203ENST00000441443 EIPR1Q53HC9 387 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 TCF7L1Q9HCS4 588 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF281Q9Y2X9 895 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 ADAM18Q9Y3Q7 739 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
SHOX2-203ENST00000441443 CTNSO60931 367 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 GP1BAP07359 652 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 GTF2F2P13984 249 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 PVALBP20472 110 aaPredicted RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MAPK3P27361 379 aaPredicted RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 SNRPNP63162 240 aaKnown RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 DUSP8Q13202 625 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 TMEM240Q5SV17 173 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 PM20D2Q8IYS1 436 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 DND1Q8IYX4 353 aaKnown RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 OR2L13Q8N349 312 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 SUSD6Q92537 303 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 LGR4Q9BXB1 951 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 PTPRSQ13332 1948 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 ARPC4-TTLL3A0A0A6YYG9 625 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MAS1P04201 325 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 H2AFB1P0C5Y9 115 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 BTN3A2P78410 334 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 IGSF11Q5DX21 431 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 OR2W3Q7Z3T1 314 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 CXorf40AQ8TE69 158 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 HSPA12BQ96MM6 686 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF471Q9BX82 626 aaPredicted RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 CTSFQ9UBX1 484 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 IER3IP1Q9Y5U9 82 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms