RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 BMP8AQ7Z5Y6 402 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ABCA7Q8IZY2 2146 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 AVL9Q8NBF6 648 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 MORN4Q8NDC4 146 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR52R1Q8NGF1 315 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR51S1Q8NGJ8 323 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SLC38A3Q99624 504 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 C20orf24Q9BUV8 137 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 RAB11FIP5Q9BXF6 653 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CHRDQ9H2X0 955 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 PRR13Q9NZ81 148 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 GMEB2Q9UKD1 530 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 MED31Q9Y3C7 131 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZDBF2Q9HCK1 2354 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CFAP54Q96N23 3096 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SDK2Q58EX2 2172 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ARPC4-TTLL3A0A0A6YYG9 625 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 URADA6NGE7 173 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SGCEO43556 437 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 FADS1O60427 444 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 S100A11P31949 105 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 UBE2IP63279 158 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CDK5Q00535 292 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 TSPAN31Q12999 210 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SERTAD2Q14140 314 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 DCST2Q5T1A1 773 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 MRM1Q6IN84 353 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM52Q8NDY8 209 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR13H1Q8NG92 308 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 TMEM239Q8WW34 195 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 RSC1A1Q92681 617 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM46BQ96A09 425 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 BPIFA2Q96DR5 249 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 NMNAT3Q96T66 252 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 MTHFD2LQ9H903 347 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 TCF7L1Q9HCS4 588 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 KRCC1Q9NPI7 259 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 PNO1Q9NRX1 252 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 RP1L1Q8IWN7 2480 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 DSPPQ9NZW4 1301 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 MEIKINA0A087WXM9 373 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR2AT4A6NND4 320 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 TTLL8A6PVC2 850 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 HCRTR1O43613 425 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ANXA2P07355 339 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF10P21506 573 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ARL4DP49703 201 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 GK2Q14410 553 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNHIT3Q15649 155 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 STPG1Q5TH74 334 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 USP53Q70EK8 1073 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 GALNTL5Q7Z4T8 443 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 IL17RCQ8NAC3 791 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 CAMKVQ8NCB2 501 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR11G2Q8NGC1 345 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SDF2Q99470 211 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ELF4Q99607 663 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 KCNJ15Q99712 375 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 NPAS1Q99742 590 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR8D2Q9GZM6 311 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 SIDT1Q9NXL6 827 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 GDE1Q9NZC3 331 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM96BQ9Y3D0 163 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 IER3IP1Q9Y5U9 82 aa9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 HELZP42694 1942 aaKnown RBP9.12□□□□□ -0.95
CDC42SE1-202ENST00000439374 ELOA3DA6NLF2 546 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 HRKO00198 91 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SUSD5O60279 629 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 CDK2P24941 298 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 RBMS1P29558 406 aaKnown RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 NDUFA9Q16795 377 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ELOA3BQ3SY89 546 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ALG10BQ5I7T1 473 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 C1orf94Q6P1W5 598 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MAMSTRQ6ZN01 415 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 RASGRP3Q8IV61 690 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SDR16C5Q8N3Y7 309 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ARIH2OSQ8N7S6 290 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 BPIFCQ8NFQ6 507 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ELOA3Q8NG57 546 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MMABQ96EY8 250 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 SPACA7Q96KW9 195 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 MS4A4EQ96PG1 132 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 TEAD3Q99594 435 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 LIPT1Q9Y234 373 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 ZNF98A6NK75 572 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 F8W036 122 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 TPPPO94811 219 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 NFYBP25208 207 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 FOXL2P58012 376 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 FXYD6P3P58550 94 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 GPR85P60893 370 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 BLOC1S1P78537 153 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 GAS6Q14393 721 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 GUCA2BQ16661 112 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 OR7E24Q6IFN5 339 aa9.11□□□□□ -0.95
CDC42SE1-202ENST00000439374 FAM180AQ6UWF9 173 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms