RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SPSB2Q99619 263 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 ACTRT3Q9BYD9 372 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 SLITRK2Q9H156 845 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 BARX1Q9HBU1 254 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 MRPS30Q9NP92 439 aaKnown RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 PRDM7Q9NQW5 492 aa12.26□□□□□ -0.45
ACTN1-204ENST00000438964 APOBEC3BQ9UH17 382 aaKnown RBP12.26□□□□□ -0.45
ACTN1-204ENST00000438964 TMEM72A0PK05 275 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 RCBTB2O95199 551 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 ST6GAL1P15907 406 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 NTHL1P78549 312 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 LTBQ06643 244 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 STAC2Q6ZMT1 411 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 RANBP3LQ86VV4 465 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-204ENST00000438964 STEAP2Q8NFT2 490 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-204ENST00000438964 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
ACTN1-204ENST00000438964 MED31Q9Y3C7 131 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 EML5Q05BV3 1969 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 LRRC72A6NJI9 287 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 F5H0A9 414 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-204ENST00000438964 ACOT7O00154 380 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 OLFM2O95897 454 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 ACTL6AO96019 429 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 CPMP14384 443 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 PRKAR1BP31321 381 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 ATP1B3P54709 279 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 POLR2GP62487 172 aaKnown RBP eCLIP12.25□□□□□ -0.45
ACTN1-204ENST00000438964 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 TPGS2Q68CL5 300 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 SLC48A1Q6P1K1 146 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 FGF13Q92913 245 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 PPP1R14AQ96A00 147 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 MRGPRX3Q96LB0 322 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 SYNDIG1Q9H7V2 258 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 KLHDC2Q9Y2U9 406 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 PLXNA2O75051 1894 aa12.25□□□□□ -0.45
ACTN1-204ENST00000438964 GXYLT2A0PJZ3 443 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CPED1A4D0V7 1026 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CACNB4O00305 520 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 PAPLNO95428 1278 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 RPN2P04844 631 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CSF2RBP32927 897 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 TRAM1Q15629 374 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 DEFB134Q4QY38 66 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 LY6G6FQ5SQ64 297 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR10K2Q6IF99 312 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 H3F3CQ6NXT2 135 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ABHD17CQ6PCB6 329 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 NKD1Q969G9 470 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ARRDC3Q96B67 414 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 SDF2Q99470 211 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 TMPRSS13Q9BYE2 586 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 C14orf105Q9NVL8 296 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 RASL12Q9NYN1 266 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 AKAP7Q9P0M2 348 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 KANTRA0A1W2PQU2 76 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 HMSDA8MTL9 139 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CTDSPLO15194 276 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ALOX12BO75342 701 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ANXA2P07355 339 aaKnown RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF28P17035 718 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 AQP2P41181 271 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CAPZA1P52907 286 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 PAN3Q58A45 887 aaKnown RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 CD163Q86VB7 1156 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR2A1Q8NGT9 310 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR5K2Q8NHB8 316 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 RXFP4Q8TDU9 374 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 IRF7Q92985 503 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 NOP16Q9Y3C1 178 aaKnown RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR5H14A6NHG9 310 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 LATS1O95835 1130 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 PAK4O96013 591 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ACAA1P09110 424 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 SELPP16109 830 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 MLF2Q15773 248 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OVCH1Q7RTY7 1134 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 TMEM17Q86X19 198 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR4S1Q8NGB4 309 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 OR6K3Q8NGY3 331 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 HAVCR1Q96D42 359 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 JAM3Q9BX67 310 aa12.24□□□□□ -0.45
ACTN1-204ENST00000438964 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
ACTN1-204ENST00000438964 TSPAN11A1L157 253 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 NAP1L6A6NFF2 107 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 SNRPGP15A8MWD9 76 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 EEF1E1-BLOC1S5C9J1V9 151 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 OGG1O15527 345 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 TGM5O43548 720 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 LRG1P02750 347 aa12.23□□□□□ -0.45
ACTN1-204ENST00000438964 GP1BAP07359 652 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms