RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZNF432O94892 652 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 CDH2P19022 906 aaPredicted RBP21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 TNFRSF1BP20333 461 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 IFNA8P32881 189 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 SH3BGRP55822 239 aaPredicted RBP21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 MS4A18Q3C1V0 323 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 HMBOX1Q6NT76 420 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 TSPYL5Q86VY4 417 aaPredicted RBP21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 LRRC75A-AS1Q8N1F1 130 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 PIK3C3Q8NEB9 887 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 ANKK1Q8NFD2 765 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 FBXW5Q969U6 566 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 FKRPQ9H9S5 495 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 NANSQ9NR45 359 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 MGAT4BQ9UQ53 548 aa21.71■■□□□ 1.07
RAPGEF1-206ENST00000438647 RAI1Q7Z5J4 1906 aaPredicted RBP21.7■■□□□ 1.07
RAPGEF1-206ENST00000438647 DSCAMO60469 2012 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 ITPR3Q14573 2671 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 LRRN3E7EW58 273 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 CXCR6O00574 342 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 OR6A2O95222 327 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 WNT11O96014 354 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 THRBP10828 461 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 PTAFRP25105 342 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 RBM34P42696 430 aaKnown RBP21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 OR1E2P47887 323 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 PRPS1P60891 318 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 POU3F1Q03052 451 aaPredicted RBP21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF74Q16587 644 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 PXKQ7Z7A4 578 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 TGIF2LYQ8IUE0 185 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 GPR137CQ8N3F9 429 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 TMEM171Q8WVE6 324 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 OBP2BQ9NPH6 170 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF229Q9UJW7 825 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 ARL2BPQ9Y2Y0 163 aa21.7■■□□□ 1.06
RAPGEF1-206ENST00000438647 A0A1W2PR80 420 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 KPNA4O00629 521 aaPredicted RBP21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 PLPP3O14495 311 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 ABCD4O14678 606 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 ARHGEF9O43307 516 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 UPK3AO75631 287 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 CH25HO95992 272 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 ADORA3P0DMS8 318 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 AHCYP23526 432 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 PAX7P23759 505 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 GSK3BP49841 420 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 PSME3P61289 254 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF672Q499Z4 452 aaPredicted RBP21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 WDR31Q8NA23 367 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 KCTD14Q9BQ13 255 aaPredicted RBP21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 PRSS27Q9BQR3 290 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 CXorf56Q9H5V9 222 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 SPAG4Q9NPE6 437 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 ABCD2Q9UBJ2 740 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 RIMS3Q9UJD0 308 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 VPS13CQ709C8 3753 aa21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 MAP1AP78559 2803 aaPredicted RBP21.69■■□□□ 1.06
RAPGEF1-206ENST00000438647 RPL36A-HNRNPH2H7BZ11 118 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 SHOX2O60902 331 aaPredicted RBP21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 HPRP00739 348 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 HIST1H2ABP04908 130 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF83P51522 516 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 NKX6-1P78426 367 aaPredicted RBP21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 ROR2Q01974 943 aaKnown RBP21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 LGALS3BPQ08380 585 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 PIN1Q13526 163 aaPredicted RBP21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 SHEQ5VZ18 495 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 HIST3H2AQ7L7L0 130 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 PIGWQ7Z7B1 504 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 KBTBD8Q8NFY9 601 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 OR1K1Q8NGR3 316 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 HIST1H2ACQ93077 130 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 HS6ST2Q96MM7 605 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 LRRC37BQ96QE4 947 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 OR2M2Q96R28 347 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 CADP27708 2225 aa21.68■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF726A6NNF4 738 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 M0R1B8 84 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 DCTN3O75935 186 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 IGF2P01344 180 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 MT-ND1P03886 318 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 UMPSP11172 480 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 HLA-DOBP13765 273 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 CD40P25942 277 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 ADAM8P78325 824 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 TMEM123Q8N131 208 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 DEPDC4Q8N2C3 294 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 PIAS4Q8N2W9 510 aaPredicted RBP21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 LILRB1Q8NHL6 650 aaPredicted RBP21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 GEMIN6Q8WXD5 167 aaKnown RBP21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 LRR1Q96L50 414 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 PRRC1Q96M27 445 aa21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 MOV10Q9HCE1 1003 aaKnown RBP21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 GMPR2Q9P2T1 348 aaKnown RBP21.67■■□□□ 1.06
RAPGEF1-206ENST00000438647 ZNF682O95780 498 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 IFNW1P05000 195 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 HOXB1P14653 301 aaPredicted RBP21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 CDH11P55287 796 aa21.66■■□□□ 1.06
RAPGEF1-206ENST00000438647 UBE2NP61088 152 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms