RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 RAP1BP61224 184 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 RPL27P61353 136 aaKnown RBP13.89□□□□□ -0.19
SGCE-205ENST00000437425 RAP1AP62834 184 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 FOXF1Q12946 379 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 SELENBP1Q13228 472 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 STPG1Q5TH74 334 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 CD200R1LQ6Q8B3 271 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 ATP6V1C2Q8NEY4 427 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 TM9SF4Q92544 642 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 NXPE2Q96DL1 559 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 EXOSC4Q9NPD3 245 aaKnown RBP13.89□□□□□ -0.19
SGCE-205ENST00000437425 P4HTMQ9NXG6 502 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 ALKBH4Q9NXW9 302 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 FOXJ2Q9P0K8 574 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 TEKT2Q9UIF3 430 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 VDAC3Q9Y277 283 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 B3GALT5Q9Y2C3 310 aa13.89□□□□□ -0.19
SGCE-205ENST00000437425 TRDV1A0A1B0GX56 115 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 C17orf51A8MQB3 221 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 SNPHO15079 494 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 SEC14L5O43304 696 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 RAD1O60671 282 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 TNFSF15O95150 251 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 IL1AP01583 271 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 F13BP05160 661 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 INHBBP09529 407 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 CLUP10909 449 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 CDKN2AP42771 156 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 MRPL28Q13084 256 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 ZNF846Q147U1 533 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 GLYR1Q49A26 553 aaPredicted RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 GXYLT1Q4G148 440 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 ARSKQ6UWY0 536 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 KCTD20Q7Z5Y7 419 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 TMEM99Q8N816 258 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 MCFD2Q8NI22 146 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 TMEM41AQ96HV5 264 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 KCTD7Q96MP8 289 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 TSPAN32Q96QS1 320 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 MED18Q9BUE0 208 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 NXF2Q9GZY0 626 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 KCNN2Q9H2S1 579 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 PARD6AQ9NPB6 346 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 ZNF346Q9UL40 294 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 SF3B6Q9Y3B4 125 aaKnown RBP13.88□□□□□ -0.19
SGCE-205ENST00000437425 HDGFL3Q9Y3E1 203 aa13.88□□□□□ -0.19
SGCE-205ENST00000437425 C2orf72A6NCS6 295 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 METTL15A6NJ78 407 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.87□□□□□ -0.19
SGCE-205ENST00000437425 CLDN25C9JDP6 229 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 TERTO14746 1132 aaKnown RBP13.87□□□□□ -0.19
SGCE-205ENST00000437425 CELA2AP08217 269 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 F8A1P23610 371 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 DSCR4P56555 118 aaPredicted RBP13.87□□□□□ -0.19
SGCE-205ENST00000437425 PUDPQ08623 228 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 C1QL3Q5VWW1 255 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 SLC6A19Q695T7 634 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 BICRALQ6AI39 1079 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 SLC16A9Q7RTY1 509 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 HDDC2Q7Z4H3 204 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 TMPRSS12Q86WS5 348 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 SLC35F2Q8IXU6 374 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 EXD3Q8N9H8 876 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 WDSUB1Q8N9V3 476 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 ZMYND19Q96E35 227 aaPredicted RBP13.87□□□□□ -0.19
SGCE-205ENST00000437425 ALG12Q9BV10 488 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 CHST11Q9NPF2 352 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
SGCE-205ENST00000437425 POLHQ9Y253 713 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 FKBP7Q9Y680 259 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 TMEM14AQ9Y6G1 99 aa13.87□□□□□ -0.19
SGCE-205ENST00000437425 GPR179Q6PRD1 2367 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 A0A1W2PNU3 283 aaPredicted RBP13.86□□□□□ -0.19
SGCE-205ENST00000437425 LIPT2A6NK58 231 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 CENPBD1B2RD01 187 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 PHYHO14832 338 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 CBR3O75828 277 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 P04436 131 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 GYPBP06028 91 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 CD1AP06126 327 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 TFPIP10646 304 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 ZNF17P17021 662 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 AHCYP23526 432 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 S100A5P33763 92 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 RPS3AP61247 264 aaKnown RBP13.86□□□□□ -0.19
SGCE-205ENST00000437425 RPS18P62269 152 aaKnown RBP13.86□□□□□ -0.19
SGCE-205ENST00000437425 CCDC58Q4VC31 144 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 MESTQ5EB52 335 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 TUBA3EQ6PEY2 450 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 KLBQ86Z14 1044 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
SGCE-205ENST00000437425 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 OR1J4Q8NGS1 313 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 OR6K6Q8NGW6 343 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 ZNF417Q8TAU3 575 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 ZNF519Q8TB69 540 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 THAP4Q8WY91 577 aa13.86□□□□□ -0.19
SGCE-205ENST00000437425 ZNF587Q96SQ5 575 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms